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13_1_40cm_4_scaffold_10534

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_10534_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3..1097
DNA (1095bp) protein (365aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=204669 species=
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMW9_KORVE
N-acetylglucosamine 6-phosphate deacetylase
13_1_40cm_4_scaffold_10534_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1629..2255
DNA (627bp) protein (209aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6J6_ACIC5
13_1_40cm_4_scaffold_10534_3
unknown

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comp(2364..2753)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_10534_4
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2883..3572)
DNA (690bp) protein (230aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSF1_ACCPU
Cholesterol dehydrogenase {ECO:0000313|EMBL:KFB72801.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_10534_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3840..5087
DNA (1248bp) protein (416aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITW7_KORVE
amino acid transporter
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABF39683.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.
13_1_40cm_4_scaffold_10534_6
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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5112..7682
DNA (2571bp) protein (857aa)
Secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
periplasmic component of the Tol biopolymer transport system
13_1_40cm_4_scaffold_10534_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(7709..8773)
DNA (1065bp) protein (355aa)
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFH82397.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EFH82397.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedo
ada; regulatory protein Ada (EC:2.1.1.63)
Transcriptional regulator, AraC family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0Q7_9CHLR
13_1_40cm_4_scaffold_10534_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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comp(8937..9380)
DNA (444bp) protein (148aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein id=1249886 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
13_1_40cm_4_scaffold_10534_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9469..11019)
DNA (1551bp) protein (517aa)
Succinate-semialdehyde dehydrogenase (NAD(P)+) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ5_KORVE
succinate-semialdehyde dehydrogenase (NAD(P)+)
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
13_1_40cm_4_scaffold_10534_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(11211..11999)
DNA (789bp) protein (263aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ4_KORVE
truA; tRNA pseudouridine synthase A
13_1_40cm_4_scaffold_10534_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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12286..14574
DNA (2289bp) protein (763aa)
Outer membrane efflux protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ3_KORVE
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABF40447.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
13_1_40cm_4_scaffold_10534_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14574..15380
DNA (807bp) protein (269aa)
Glycosyl transferase, family 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ2_KORVE
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABF40448.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_4_scaffold_10534_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(15440..15814)
DNA (375bp) protein (125aa)
T-RNA-binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020X5_SOLUE
tRNA-binding domain-containing protein
T-RNA-binding domain protein {ECO:0000313|EMBL:ABJ84514.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter us
13_1_40cm_4_scaffold_10534_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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15941..16258
DNA (318bp) protein (106aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_40cm_4_scaffold_10534_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16262..17791
DNA (1530bp) protein (510aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ABF40456.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ABF40456.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Korib
Methylmalonyl-CoA mutase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRP4_KORVE
methylmalonyl-CoA mutase
Displaying 15 items

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