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13_1_40cm_4_scaffold_1210

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1210_1
unknown

Not on your lists

comp(81..209)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(523..2607)
DNA (2085bp) protein (695aa)
hypothetical protein n=1 Tax=Bacteria RepID=UPI00036284CB
Uncharacterized protein {ECO:0000313|EMBL:AIE86000.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
hypothetical protein
13_1_40cm_4_scaffold_1210_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

3104..3619
DNA (516bp) protein (172aa)
integrase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4AFFF
phage integrase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
phage integrase family protein
13_1_40cm_4_scaffold_1210_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

3696..4049
DNA (354bp) protein (118aa)
Phage integrase family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RL1_SOLUE
phage integrase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
phage integrase family protein
13_1_40cm_4_scaffold_1210_5
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4062..4448)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003727DCA
Uncharacterized protein {ECO:0000313|EMBL:EXI92392.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
hypothetical protein
13_1_40cm_4_scaffold_1210_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4598..5032)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPV0_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_4_scaffold_1210_7
unknown

Not on your lists

comp(5044..5265)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(5262..5795)
DNA (534bp) protein (178aa)
Sigma-24, ECF subfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPU9_KORVE
ECF subfamily RNA polymerase sigma-24 factor Tax=RBG_13_Acidobacteria_68_16_curated
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_4_scaffold_1210_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6337..6969)
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
two component LuxR family transcriptional regulator Tax=CSP1_5_NC10
LuxR family transcriptional regulator
13_1_40cm_4_scaffold_1210_10
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7013..7228)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:ABF88194.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
hypothetical protein
13_1_40cm_4_scaffold_1210_11
unknown

Not on your lists

comp(7344..7559)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_12
unknown

Not on your lists

7822..8037
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_13
unknown

Not on your lists

comp(7931..8986)
DNA (1056bp) protein (352aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_14
unknown

Not on your lists

9422..9721
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_15
unknown

Not on your lists

comp(9819..10109)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_16
unknown

Not on your lists

10116..10286
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_17
unknown

Not on your lists

comp(10678..10854)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_18
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(10986..11360)
DNA (375bp) protein (125aa)
type IV pilus assembly PilZ Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
13_1_40cm_4_scaffold_1210_19
unknown

Not on your lists

comp(11416..11652)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_20
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11657..12847)
DNA (1191bp) protein (397aa)
Uncharacterized protein id=8267005 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
TPR repeat-containing protein
13_1_40cm_4_scaffold_1210_21

Not on your lists

13433..14500
DNA (1068bp) protein (356aa)
Putative transposase n=1 Tax=uncultured bacterium RM57 RepID=C8XT97_9BACT
Putative transposase {ECO:0000313|EMBL:ACI04490.1}; TaxID=561246 species="Bacteria; environmental samples.;" source="uncultured bacterium RM57.;"
hypothetical protein
13_1_40cm_4_scaffold_1210_22
unknown

Not on your lists

14808..14948
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_23
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(15059..15382)
DNA (324bp) protein (108aa)
Amidohydrolase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F1T6_MODMB
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
amidohydrolase
13_1_40cm_4_scaffold_1210_24
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

15388..15642
DNA (255bp) protein (85aa)
YD repeat-/RHS repeat-containing protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
13_1_40cm_4_scaffold_1210_trna_2
unknown

Not on your lists

comp(15900..15973)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_1210_25
unknown

Not on your lists

comp(16120..16470)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_1210_26
R_NC10_66_22, NC10, Bacteria

Not on your lists

16566..17444
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLP8_9BACT
membrane protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
membrane protein
13_1_40cm_4_scaffold_1210_27
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

17460..17906
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027M4_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_4_scaffold_1210_28

Not on your lists

comp(17960..18928)
DNA (969bp) protein (323aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=mine drainage metagenome RepID=E6QMD7_9ZZZZ
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:CBI08408.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage meta
response regulator receiver modulated diguanylate cyclase
13_1_40cm_4_scaffold_1210_29
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18925..19278)
DNA (354bp) protein (118aa)
Sensor protein (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6QMD6_9ZZZZ
PAS domain S-box Tax=GWC2_Geobacteraceae_58_44_curated
PAS domain S-box
Displaying items 1-30 of 33 in total

View Taxonomy