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13_1_40cm_4_scaffold_149

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_149_1
unknown

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3..107
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_4_scaffold_149_2
unknown

Not on your lists

76..606
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_4_scaffold_149_3
unknown

Not on your lists

545..871
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_4_scaffold_149_4
unknown

Not on your lists

926..1027
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_4_scaffold_149_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(1373..2446)
DNA (1074bp) protein (358aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGS0_CHLTF
13_1_40cm_4_scaffold_149_6
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2638..3450
DNA (813bp) protein (271aa)
ResC/HemX-like cytochrome c biogenesis membrane protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EBG6_GEOBB
ResC/HemX-like cytochrome c biogenesis membrane protein
ResC/HemX-like cytochrome c biogenesis membrane protein {ECO:0000313|EMBL:ABA90300.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobac
13_1_40cm_4_scaffold_149_7
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

3469..4746
DNA (1278bp) protein (426aa)
Glutamyl-tRNA reductase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z1B9_9BACT
glutamyl-tRNA reductase
Tax=BJP_IG2102_Coriobacteriales_64_17
13_1_40cm_4_scaffold_149_8
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4743..5660
DNA (918bp) protein (306aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
porphobilinogen deaminase n=1 Tax=Psychromonas ossibalaenae RepID=UPI00037FA43A
Porphobilinogen deaminase
13_1_40cm_4_scaffold_149_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5653..6339
DNA (687bp) protein (229aa)
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase {ECO:0000313|EMBL:ABG04924.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABG04924.1};; EC=4.2.1.75 {ECO:0000313|EMBL:ABG04924.1};; TaxID=2
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK4_RUBXD
13_1_40cm_4_scaffold_149_10
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

6418..7395
DNA (978bp) protein (326aa)
HemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=CG_Arma_01
HemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
delta-aminolevulinic acid dehydratase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6B403
13_1_40cm_4_scaffold_149_11
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7412..8740
DNA (1329bp) protein (443aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Desmospora sp. 8437 RepID=F5SAH1_9BACL
glutamate-1-semialdehyde-2,1-aminomutase
13_1_40cm_4_scaffold_149_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8763..9350)
DNA (588bp) protein (196aa)
Membrane protein-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NM0_SOLUE
Predicted membrane protein {ECO:0000313|EMBL:CDM66770.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_4_scaffold_149_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9678..12074
DNA (2397bp) protein (799aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABF42015.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABF42015.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_149_14
unknown

Not on your lists

comp(12291..12446)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_4_scaffold_149_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(12557..13966)
DNA (1410bp) protein (470aa)
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases (EC:6.3.5.6 6.3.5.7)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:CDM65792.1}; EC=6.3.5.6 {ECO:0000313|EMBL:CDM65792.1};; EC=6.3.5.7 {ECO:0000313|EMBL:CDM65792.1};; TaxID=454194 species="B
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXR8_9BACT
13_1_40cm_4_scaffold_149_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14484..15275)
DNA (792bp) protein (264aa)
Putative Response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGH0_9BACT
putative response regulator
Putative Response regulator {ECO:0000313|EMBL:CBK42357.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_149_17
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15272..16045)
DNA (774bp) protein (258aa)
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain-containing protein
response regulator Tax=CG_Delta_01
Putative uncharacterized protein id=4562488 bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_4_scaffold_149_18
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16042..16521)
DNA (480bp) protein (160aa)
Chemotaxis protein CheW {ECO:0000313|EMBL:EHP43939.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basile
13_1_40cm_4_scaffold_149_19
unknown

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comp(16518..17051)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_40cm_4_scaffold_149_20
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17051..17323)
DNA (273bp) protein (91aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=55779 species="Bacteria; Firmicutes; Clostridia;
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon n=3 Tax=Desulfovibrio vulgaris RepID=CHEB1_DESVH
13_1_40cm_4_scaffold_149_21
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17289..18140)
DNA (852bp) protein (284aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=643648 species="Bacteria; Firmicutes; Clostridia
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CM21_SYNLT
13_1_40cm_4_scaffold_149_22
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(18148..21099)
DNA (2952bp) protein (984aa)
putative chemotaxis protein CheA modulated with response regulator receiver region (EC:2.7.13.3); K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system pr
putative chemotaxis protein CheA modulated with response regulator receiver region (EC:2.7.13.3)
Putative Chemotaxis protein CheA modulated with response regulator receiver region (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGH3_9BACT
13_1_40cm_4_scaffold_149_23
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21096..21941)
DNA (846bp) protein (282aa)
protein-glutamate O-methyltransferase (EC:2.1.1.80)
Protein-glutamate O-methyltransferase {ECO:0000313|EMBL:ABP66434.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ABP66434.1};; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoa
Protein-glutamate O-methyltransferase n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XHP9_CALS8
13_1_40cm_4_scaffold_149_24
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(22005..23432)
DNA (1428bp) protein (476aa)
Methyl-accepting chemotaxis sensory transducer id=4683454 bin=GWC2_Nitrospirae_57_13 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
methyl-accepting chemotaxis sensory transducer; K02660 twitching motility protein PilJ Tax=GWC2_Nitrospirae_57_13_curated
methyl-accepting chemotaxis sensory transducer
13_1_40cm_4_scaffold_149_25
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23494..24021)
DNA (528bp) protein (176aa)
chemotaxis protein CheW n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003736D8A
CheW protein; K03408 purine-binding chemotaxis protein CheW Tax=GWA2_Gallionellales_60_18_curated
cheW; positive regulator of CheA protein activity protein
13_1_40cm_4_scaffold_149_26
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(24047..24409)
DNA (363bp) protein (121aa)
Putative Chemotaxis regulator CheY n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGH6_9BACT
putative chemotaxis regulator CheY
Putative Chemotaxis regulator CheY {ECO:0000313|EMBL:CBK42363.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_149_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24543..25226)
DNA (684bp) protein (228aa)
Histidine kinase A-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQR8_KORVE
histidine kinase A-like protein
Histidine kinase A-like protein {ECO:0000313|EMBL:ABF40782.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_1_40cm_4_scaffold_149_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(25284..26792)
DNA (1509bp) protein (503aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQR9_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40781.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_149_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(26771..27118)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQS0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40780.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_149_30
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(27387..28793)
DNA (1407bp) protein (469aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQS1_KORVE
Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABF40779.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
Displaying items 1-30 of 44 in total

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