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13_1_40cm_4_scaffold_1990

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1990_1
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Thermus igniterrae RepID=UPI000365A25C
Phosphoribosylaminoimidazole carboxylase ATPase subunit
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
13_1_40cm_4_scaffold_1990_2
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(341..886)
DNA (546bp) protein (182aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUA8_ROSS1
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
13_1_40cm_4_scaffold_1990_3

Not on your lists

comp(1039..1485)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037993D6
Uncharacterized protein {ECO:0000313|EMBL:KKK82902.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cyclase
13_1_40cm_4_scaffold_1990_4
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

1737..2651
DNA (915bp) protein (305aa)
Serine protease n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NEY6_GLOVI
serine protease
Serine protease {ECO:0000313|EMBL:BAC91682.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_1_40cm_4_scaffold_1990_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2653..3522
DNA (870bp) protein (290aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SP4_SOLUE
peptidase S1 and S6, chymotrypsin/Hap
Peptidase S1 and S6, chymotrypsin/Hap {ECO:0000313|EMBL:ABJ87326.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
13_1_40cm_4_scaffold_1990_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3519..4157
DNA (639bp) protein (213aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T661_9CYAN
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIJ79272.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB5
two component LuxR family transcriptional regulator
13_1_40cm_4_scaffold_1990_7
unknown

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4262..4669
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_4_scaffold_1990_8
unknown

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4662..5165
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_40cm_4_scaffold_1990_9

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6051..7451
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q3C2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI01683.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Major facilitator superfamily permease
13_1_40cm_4_scaffold_1990_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7570..8052)
DNA (483bp) protein (161aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein id=14627432 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1990_11
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8243..8617
DNA (375bp) protein (125aa)
Cytochrome c, mono-and diheme variants family n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZBV6_TERRK
cytochrome c, mono- and diheme variants family
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:AFL86724.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" sourc
13_1_40cm_4_scaffold_1990_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8926..9216)
DNA (291bp) protein (97aa)
Histone family protein DNA-binding protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V5E9_TERSS
hupB; transcriptional dual regulator HU-beta; K03530 DNA-binding protein HU-beta Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
histone family protein DNA-binding protein
13_1_40cm_4_scaffold_1990_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9559..9753)
DNA (195bp) protein (65aa)
Acetylornithine deacetylase-like protein id=4811984 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Acetylornithine deacetylase-like protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
peptidase M20
13_1_40cm_4_scaffold_1990_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9704..10939)
DNA (1236bp) protein (412aa)
Acetylornithine deacetylase-like protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Acetylornithine deacetylase-like protein id=4811984 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
acetylornithine deacetylase-like protein
13_1_40cm_4_scaffold_1990_15
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

11541..12896
DNA (1356bp) protein (452aa)
outer membrane receptor for ferrienterochelin and colicins Tax=RBG_13_Nitrospirae_43_8_curated
TonB-dependent receptor id=4819228 bin=GWC2_Syntrophus__56_31 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
outer membrane receptor for ferrienterochelin and colicins
13_1_40cm_4_scaffold_1990_16
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12929..13411
DNA (483bp) protein (161aa)
Outer membrane receptor proteins mostly Fe transport {ECO:0000313|EMBL:GAN34880.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Ca
TonB-dependent receptor id=3018610 bin=GWF2_Syntrophobacterales_56_9 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
TonB-dependent receptor
13_1_40cm_4_scaffold_1990_17
RLO_PLX_64_10, Bacteria

Not on your lists

13902..15878
DNA (1977bp) protein (659aa)
TonB-dependent receptor, plug n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEZ5_9BACT
TonB-dependent receptor, plug; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
TonB-dependent receptor, plug
13_1_40cm_4_scaffold_1990_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16217..16531
DNA (315bp) protein (105aa)
transmembrane protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
transmembrane protein id=14623135 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
transmembrane protein
13_1_40cm_4_scaffold_1990_19
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

16533..19334
DNA (2802bp) protein (934aa)
Sensor protein (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6QMD6_9ZZZZ
PAS domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
putative hybrid sensor and regulator protein
13_1_40cm_4_scaffold_1990_20
unknown

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19398..19781
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_4_scaffold_1990_21
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(20437..21162)
DNA (726bp) protein (242aa)
Oxidoreductase, molybdopterin binding n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PH6_SOLUE
sulfite oxidase subunit YedY; K07147 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
sulfite oxidase subunit YedY
Displaying 21 items

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