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13_1_40cm_4_scaffold_1995

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1995_1
unknown

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comp(3..218)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_4_scaffold_1995_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(862..1665)
DNA (804bp) protein (268aa)
ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXC6_OPITP
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACB76921.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-
13_1_40cm_4_scaffold_1995_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1693..3027)
DNA (1335bp) protein (445aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter sp. (strain M18) RepID=E8WJJ6_GEOS8
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
RND family efflux transporter MFP subunit
13_1_40cm_4_scaffold_1995_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3059..4285)
DNA (1227bp) protein (409aa)
multidrug ABC transporter substrate-binding protein n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B6485F
export ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
hypothetical protein
13_1_40cm_4_scaffold_1995_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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4661..5656
DNA (996bp) protein (332aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein id=14428720 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1995_6

Not on your lists

5656..9492
DNA (3837bp) protein (1279aa)
Putative Sensor protein {ECO:0000313|EMBL:CBI00657.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBI00657.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine dra
Putative Sensor protein n=1 Tax=mine drainage metagenome RepID=E6Q0E8_9ZZZZ
PAS/PAC sensor hybrid histidine kinase
13_1_40cm_4_scaffold_1995_7

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9501..9794
DNA (294bp) protein (98aa)
Putative Sensor protein {ECO:0000313|EMBL:CBI00657.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBI00657.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine dra
Putative Sensor protein n=1 Tax=mine drainage metagenome RepID=E6Q0E8_9ZZZZ
signal transduction histidine kinase
13_1_40cm_4_scaffold_1995_8

Not on your lists

9791..10234
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q0E7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI00656.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
two-component response regulator
13_1_40cm_4_scaffold_1995_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10210..10899
DNA (690bp) protein (230aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIM1_KORVE
response regulator receiver protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
response regulator receiver protein
13_1_40cm_4_scaffold_1995_10
unknown

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11225..11596
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_4_scaffold_1995_11
unknown

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comp(11593..12426)
DNA (834bp) protein (278aa)

This feature has no annotations

13_1_40cm_4_scaffold_1995_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12774..13115
DNA (342bp) protein (114aa)
magnesium protoporphyrin chelatase; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Magnesium protoporphyrin chelatase, putative n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025X1_SOLUE
magnesium protoporphyrin chelatase
13_1_40cm_4_scaffold_1995_13
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

13144..14418
DNA (1275bp) protein (425aa)
von Willebrand factor, type A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILJ2_KORVE
von Willebrand factor A; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
von Willebrand factor A
13_1_40cm_4_scaffold_1995_14
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(14576..19042)
DNA (4467bp) protein (1489aa)
Ig family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NN75_ROSCS
Ig family protein {ECO:0000313|EMBL:ABU59007.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenhol
Ig family protein
13_1_40cm_4_scaffold_1995_15
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19526..21940
DNA (2415bp) protein (805aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003812B3C
CadC family transcriptional regulator
Transcriptional regulator, CadC {ECO:0000313|EMBL:ADW69592.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (str
13_1_40cm_4_scaffold_1995_16
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22349..23032
DNA (684bp) protein (228aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" s
Multi-sensor signal transduction histidine kinase n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SE91_9CYAN
multi-sensor signal transduction histidine kinase
Displaying 16 items

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