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13_1_40cm_4_scaffold_264

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_264_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3..1037
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUQ0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39400.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_4_scaffold_264_trna_1
unknown

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1369..1443
DNA (75bp)
transferRNA
13_1_40cm_4_scaffold_264_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1667..4051)
DNA (2385bp) protein (795aa)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F713_ACIC5
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:ACO32926.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium
aldehyde dehydrogenase (NAD) family protein
13_1_40cm_4_scaffold_264_3
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4097..5158)
DNA (1062bp) protein (354aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granuli
Deoxyribose-phosphate aldolase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NVN3_GRAMM
deoxyribose-phosphate aldolase
13_1_40cm_4_scaffold_264_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(5224..6120)
DNA (897bp) protein (299aa)
Ribokinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R22_SOLUE
ribokinase
Ribokinase {ECO:0000313|EMBL:ABJ87898.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ell
13_1_40cm_4_scaffold_264_5
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6175..7104)
DNA (930bp) protein (310aa)
putative proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWA2_Ignavibacteria_54_16_curated
Proline dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT id=5223515 bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative proline dehydrogenase
13_1_40cm_4_scaffold_264_6
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7177..7905)
DNA (729bp) protein (243aa)
MIP family channel protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036CD9F6
glycerol uptake facilitator protein
Glycerol uptake facilitator protein {ECO:0000313|EMBL:BAF88709.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizo
13_1_40cm_4_scaffold_264_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(7919..9421)
DNA (1503bp) protein (501aa)
Glycerol kinase {ECO:0000255|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000255|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000255|HAMAP
Glycerol kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=GLPK_SOLUE
glycerol kinase
13_1_40cm_4_scaffold_264_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9602..10615
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F8671
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_264_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10978..12093)
DNA (1116bp) protein (372aa)
Transcriptional regulator, LacI family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR67_KORVE
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABF40633.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_1_40cm_4_scaffold_264_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12149..13492)
DNA (1344bp) protein (448aa)
Putrescine:proton symporter, AAT family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM83_KORVE
amino acid transporter
Putrescine:proton symporter, AAT family {ECO:0000313|EMBL:ABF42017.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_1_40cm_4_scaffold_264_11
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13792..15102
DNA (1311bp) protein (437aa)
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GAF sensor-containing diguanylate cyclase
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ADU50854.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;"
13_1_40cm_4_scaffold_264_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(15133..16287)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCAF7
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
FAD dependent oxidoreductase
13_1_40cm_4_scaffold_264_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16393..19575
DNA (3183bp) protein (1061aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INL6_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF41534.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_40cm_4_scaffold_264_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19739..20500)
DNA (762bp) protein (254aa)
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5] Tax=GWC2_Rokubacteria_70_16_curated
5'-nucleotidase SurE id=4849889 bin=GWC2_Methylomirabilis_70_16 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
stationary-phase survival protein SurE
13_1_40cm_4_scaffold_264_trna_2
unknown

Not on your lists

comp(20604..20677)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_264_15
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20752..21222)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000374D968
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:ELQ15623.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xan
13_1_40cm_4_scaffold_264_16
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(21226..22740)
DNA (1515bp) protein (505aa)
GTPase Der n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F793_ACIC5
engA; GTP-binding protein EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales
13_1_40cm_4_scaffold_264_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

23020..23283
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UR6_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86604.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_4_scaffold_264_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(23307..24521)
DNA (1215bp) protein (405aa)
argJ; arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35 2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPHIGHO2_01_FULL_Acidob
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000378E901
13_1_40cm_4_scaffold_264_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(24645..26072)
DNA (1428bp) protein (476aa)
argH; argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
argH; argininosuccinate lyase (EC:4.3.2.1) id=14627101 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argH; argininosuccinate lyase
13_1_40cm_4_scaffold_264_20
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(26219..27442)
DNA (1224bp) protein (408aa)
argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
argininosuccinate synthase (EC:6.3.4.5)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003786637
13_1_40cm_4_scaffold_264_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(27540..28490)
DNA (951bp) protein (317aa)
ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037697D5
ornithine carbamoyltransferase
13_1_40cm_4_scaffold_264_22
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(28496..28813)
DNA (318bp) protein (106aa)
acetylornithine/succinyldiaminopimelate aminotransferase; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_13_WOR_2_41_10_curated
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023W8_SOLUE
Displaying 24 items

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