ggKbase home page

13_1_40cm_4_scaffold_3078

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3078_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

182..667
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQH4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40876.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_3078_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

706..1038
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPK1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41199.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_3078_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

1062..1313
DNA (252bp) protein (84aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
13_1_40cm_4_scaffold_3078_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1310..1738
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IPW2_9BACT
hypothetical protein
PilT domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
13_1_40cm_4_scaffold_3078_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2045..2959)
DNA (915bp) protein (305aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ6_KORVE
tRNA pseudouridine synthase B
13_1_40cm_4_scaffold_3078_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3069..3782
DNA (714bp) protein (238aa)
Rhomboid-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ5_KORVE
rhomboid-like protein
Rhomboid-like protein {ECO:0000313|EMBL:ABF41205.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_1_40cm_4_scaffold_3078_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3993..4724)
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ3_KORVE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABF41207.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_1_40cm_4_scaffold_3078_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4817..5416)
DNA (600bp) protein (200aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ1_KORVE
GTP cyclohydrolase
13_1_40cm_4_scaffold_3078_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5561..5983)
DNA (423bp) protein (141aa)
6-pyruvoyl tetrahydropterin synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ0_KORVE
6-pyruvoyl tetrahydrobiopterin synthase
6-pyruvoyl tetrahydropterin synthase {ECO:0000313|EMBL:ABF41210.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
13_1_40cm_4_scaffold_3078_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5980..6390)
DNA (411bp) protein (137aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteria
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPI9_KORVE
6-pyruvoyl tetrahydrobiopterin synthase
13_1_40cm_4_scaffold_3078_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6405..7508)
DNA (1104bp) protein (368aa)
Glycosyl transferase, family 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPI8_KORVE
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABF41212.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_4_scaffold_3078_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7534..8022
DNA (489bp) protein (163aa)
Thioredoxin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPI7_KORVE
thioredoxin-like protein
Thioredoxin-like protein {ECO:0000313|EMBL:ABF41213.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
13_1_40cm_4_scaffold_3078_13
unknown

Not on your lists

comp(8176..8250)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 13 items

View Taxonomy