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13_1_40cm_4_scaffold_3137

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3137_1
unknown

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1..351
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_3137_2

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830..1972
DNA (1143bp) protein (381aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY23_THERP
Marine sediment metagenome DNA, contig: S01H4_L01055 {ECO:0000313|EMBL:GAG70065.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_4_scaffold_3137_3
unknown

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2057..2446
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_3137_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2532..3179)
DNA (648bp) protein (216aa)
Transcriptional regulator n=1 Tax=uncultured bacterium RepID=L7Y6Q0_9BACT
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AHG91881.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3137_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3287..4303
DNA (1017bp) protein (339aa)
Short-chain dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XH69_SORCE
short-chain dehydrogenase
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EYF00054.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.
13_1_40cm_4_scaffold_3137_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4384..5373)
DNA (990bp) protein (330aa)
Beta-lactamase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ8_KORVE
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABF40002.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versati
13_1_40cm_4_scaffold_3137_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5994..7388
DNA (1395bp) protein (465aa)
Lytic transglycosylase, catalytic n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU96_KORVE
lytic transglycosylase, catalytic
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABF39554.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source=
13_1_40cm_4_scaffold_3137_8
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7637..7948
DNA (312bp) protein (104aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Uncharacterized protein n=1 Tax=Rhodococcus opacus M213 RepID=K8Y405_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:EKT84450.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
13_1_40cm_4_scaffold_3137_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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8188..8973
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISE9_KORVE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_3137_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

8977..9843
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZB67_TERRK
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_3137_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(9932..11299)
DNA (1368bp) protein (456aa)
dihydrolipoyllysine-residue succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase {ECO:0000313|EMBL:ABJ81913.1}; EC=2.3.1.61 {ECO:0000313|EMBL:ABJ81913.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales;
Dihydrolipoyllysine-residue succinyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AK3_SOLUE
13_1_40cm_4_scaffold_3137_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(11321..12340)
DNA (1020bp) protein (340aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase E1 component {ECO:0000313|EMBL:ABJ81365.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ABJ81365.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibac
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C51_SOLUE
13_1_40cm_4_scaffold_3137_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(12343..13608)
DNA (1266bp) protein (422aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit {ECO:0000313|EMBL:CDM66807.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CDM66807.1};; TaxID=454194 species="Bacteria; Acidobact
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000378E2E1
13_1_40cm_4_scaffold_3137_14
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(13623..14084)
DNA (462bp) protein (154aa)
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Octanoyltransferase (EC:2.3.1.181)
Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1D6W8_EMIHU
13_1_40cm_4_scaffold_3137_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(14063..14308)
DNA (246bp) protein (82aa)
lipB; lipoate biosynthesis protein B; Lipoate-protein ligase B (EC:2.3.1.-)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFX3_9BACT
13_1_40cm_4_scaffold_3137_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14460..15857)
DNA (1398bp) protein (466aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
dihydrolipoyl dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037D39E7
dihydrolipoamide dehydrogenase
13_1_40cm_4_scaffold_3137_17
R_WOR_2_48_11, WOR-2, Bacteria

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16477..17583
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00036C59D7
peptidase S1 and S6 chymotrypsin/Hap Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
peptidase S1 and S6 chymotrypsin/Hap
13_1_40cm_4_scaffold_3137_18
unknown

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17608..17937
DNA (330bp) protein (110aa)

This feature has no annotations

Displaying 18 items

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