ggKbase home page

13_1_40cm_4_scaffold_3271

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3271_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

13_1_40cm_4_scaffold_3271_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1241..1861
DNA (621bp) protein (207aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Ca
Pyruvate dehydrogenase E1 component n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMV7_KORVE
aceE; pyruvate dehydrogenase subunit E1
13_1_40cm_4_scaffold_3271_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

1836..3023
DNA (1188bp) protein (396aa)
aceE; pyruvate dehydrogenase subunit E1; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Pyruvate dehydrogenase E1 component n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMV7_KORVE
aceE; pyruvate dehydrogenase subunit E1
13_1_40cm_4_scaffold_3271_4
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

3115..4860
DNA (1746bp) protein (582aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinoc
Dihydrolipoamide acetyltransferase n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IX53_DEIGD
dihydrolipoamide acetyltransferase
13_1_40cm_4_scaffold_3271_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5005..6426
DNA (1422bp) protein (474aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
Dihydrolipoyl dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMV9_KORVE
dihydrolipoamide dehydrogenase
13_1_40cm_4_scaffold_3271_6
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

6677..7111
DNA (435bp) protein (145aa)
Uncharacterized protein id=2297580 bin=GWA2_Elusimicrobia_66_18 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein Tax=GWC2_Elusimicrobia_65_9_curated
hypothetical protein
13_1_40cm_4_scaffold_3271_7
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

7102..8718
DNA (1617bp) protein (539aa)
hypothetical protein Tax=GWC2_Elusimicrobia_65_9_curated
Uncharacterized protein id=2297580 bin=GWA2_Elusimicrobia_66_18 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
13_1_40cm_4_scaffold_3271_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(8708..9760)
DNA (1053bp) protein (351aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y05_SOLUE
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABJ85460.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soliba
13_1_40cm_4_scaffold_3271_9
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9770..10396)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI000289611A
Uncharacterized protein {ECO:0000313|EMBL:EPC03610.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
hypothetical protein
13_1_40cm_4_scaffold_3271_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10694..12610
DNA (1917bp) protein (639aa)
Putative GAF sensor protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRK4_KORVE
GAF sensor protein
Putative GAF sensor protein {ECO:0000313|EMBL:ABF40496.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_1_40cm_4_scaffold_3271_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12840..14831
DNA (1992bp) protein (664aa)
UvrABC system protein B n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQR7_KORVE
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
13_1_40cm_4_scaffold_3271_12
unknown

Not on your lists

comp(15357..15527)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_4_scaffold_3271_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15620..16303)
DNA (684bp) protein (228aa)
Histidine kinase A-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQR8_KORVE
histidine kinase A-like protein
Histidine kinase A-like protein {ECO:0000313|EMBL:ABF40782.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_1_40cm_4_scaffold_3271_14
unknown

Not on your lists

comp(16337..16660)
DNA (324bp) protein (108aa)

This feature has no annotations

Displaying 14 items

View Taxonomy