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13_1_40cm_4_scaffold_344

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_344_1
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..322
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI0003787166
putative short-chain dehydrogenase
Putative short-chain dehydrogenase {ECO:0000313|EMBL:AGI26836.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
13_1_40cm_4_scaffold_344_2
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

533..2635
DNA (2103bp) protein (701aa)
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZHE7_TERRK
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AFL88665.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglo
13_1_40cm_4_scaffold_344_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2815..3081)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027A3_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82910.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_4_scaffold_344_4
Caldithrix abyssi, Caldithrix, Bacteria

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4036..5472
DNA (1437bp) protein (479aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=880073 species="Bacteria; Caldithrix.;" sourc
DNA polymerase IV n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUV2_9BACT
DNA polymerase IV
13_1_40cm_4_scaffold_344_5
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

5598..8999
DNA (3402bp) protein (1134aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
DNA polymerase III, alpha subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWS3_9BACT
DNA-directed DNA polymerase III PolC
13_1_40cm_4_scaffold_344_6
unknown

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9038..9322
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_344_7
Penicillium oxalicum, Penicillium, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

9319..10410
DNA (1092bp) protein (364aa)
dihydrolipoamide succinyltransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B51EDA
Uncharacterized protein {ECO:0000313|EMBL:EPS26797.1}; TaxID=933388 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penici
Poly granule associated protein
13_1_40cm_4_scaffold_344_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10489..11400)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM1_KORVE
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABF40479.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_1_40cm_4_scaffold_344_9
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(11468..15850)
DNA (4383bp) protein (1461aa)
glutamate synthase [nadph] large chain (EC:1.4.1.13)
Glutamate synthase [nadph] large chain {ECO:0000313|EMBL:ACM05049.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ACM05049.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Th
Glutamate synthase [nadph] large chain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0N4_THERP
13_1_40cm_4_scaffold_344_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15946..17349)
DNA (1404bp) protein (468aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK34_KORVE
peptidase U62, modulator of DNA gyrase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_1_40cm_4_scaffold_344_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17346..18806)
DNA (1461bp) protein (487aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK33_KORVE
peptidase U62, modulator of DNA gyrase; K03568 TldD protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_1_40cm_4_scaffold_344_12
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18916..20190)
DNA (1275bp) protein (425aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1E9_ACIC5
13_1_40cm_4_scaffold_344_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(20277..21464)
DNA (1188bp) protein (396aa)
methionine adenosyltransferase (EC:2.5.1.6)
methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
S-adenosylmethionine synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA3_CHLTF
13_1_40cm_4_scaffold_344_14
unknown

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comp(21770..22132)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_4_scaffold_344_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(22260..23909)
DNA (1650bp) protein (550aa)
ASPIC/UnbV domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PC2_SOLUE
ASPIC/UnbV domain-containing protein
ASPIC/UnbV domain protein {ECO:0000313|EMBL:ABJ88498.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
13_1_40cm_4_scaffold_344_16
R_Coxiella_44_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23896..25710)
DNA (1815bp) protein (605aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UR51_ROSS1
tetratricopeptide repeat family protein Tax=RIFCSPHIGHO2_12_FULL_Coxiella_44_14_curated
hypothetical protein
13_1_40cm_4_scaffold_344_17
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

25907..26770
DNA (864bp) protein (288aa)
Alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen id=4798586 bin=GWC2_Nitrospirae-rel_56_14 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen Tax=GWC2_Nitrospirae_56_14_curated
redoxin domain-containing protein
13_1_40cm_4_scaffold_344_18
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

26767..27675
DNA (909bp) protein (303aa)
ABC-type multidrug transport system, ATPase component Tax=GWC2_Nitrospirae_56_14_curated
ABC transporter related protein id=4798585 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ABC transporter
13_1_40cm_4_scaffold_344_19
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

27736..28539
DNA (804bp) protein (268aa)
id=4847155 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
id=4847155 Tax=GWC2_Nitrospirae_56_14_curated
13_1_40cm_4_scaffold_344_20
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(28951..29946)
DNA (996bp) protein (332aa)
Peptide chain release factor 2 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F428_ACIC5
prfB; peptide chain release factor 2, programmed frameshift
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobact
13_1_40cm_4_scaffold_344_21
unknown

Not on your lists

30108..30272
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_4_scaffold_344_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(30194..31315)
DNA (1122bp) protein (374aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Apolipoprotein N-acyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP58_KORVE
apolipoprotein N-acyltransferase
Displaying 22 items

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