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13_1_40cm_4_scaffold_3512

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3512_1
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3..416)
DNA (414bp) protein (138aa)
Putative membrane protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7R7_ACIC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACO31355.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain
13_1_40cm_4_scaffold_3512_2
R_NC10_66_22, NC10, Bacteria

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609..1580
DNA (972bp) protein (324aa)
threonine ammonia-lyase, biosynthetic; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Threonine ammonia-lyase, biosynthetic n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1A5_THERP
threonine ammonia-lyase, biosynthetic
13_1_40cm_4_scaffold_3512_3

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comp(1643..2839)
DNA (1197bp) protein (399aa)
Lipoprotein n=1 Tax=mine drainage metagenome RepID=T0ZH55_9ZZZZ
Lipoprotein {ECO:0000313|EMBL:EQD47596.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_3512_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(3040..3354)
DNA (315bp) protein (105aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ82042.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ82042.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000382B003
13_1_40cm_4_scaffold_3512_5
unknown

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3715..3990
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_3512_6
unknown

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comp(3987..4178)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_4_scaffold_3512_7
unknown

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4252..4911
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_40cm_4_scaffold_3512_8
unknown

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5029..5235
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_3512_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(5253..5606)
DNA (354bp) protein (118aa)
anti-sigma factor antagonist n=1 Tax=Curtobacterium sp. B18 RepID=UPI000345871A
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter
13_1_40cm_4_scaffold_3512_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(5718..6002)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q61_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88209.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_4_scaffold_3512_11
RLO_PLX_64_10, Bacteria

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6157..6618
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRL5_9BACT
chromate resistance exported protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_40cm_4_scaffold_3512_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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6615..7850
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG0_NIAKG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
major facilitator superfamily protein
13_1_40cm_4_scaffold_3512_13
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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8075..9214
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQI5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB63980.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
13_1_40cm_4_scaffold_3512_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9252..11468
DNA (2217bp) protein (739aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B0FA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39823.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_4_scaffold_3512_15
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(11454..12080)
DNA (627bp) protein (209aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" sou
GAF sensor signal transduction histidine kinase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W2G0_9CYAN
GAF sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_3512_16
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12330..13661
DNA (1332bp) protein (444aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
Glycoside hydrolase family 29 (Alpha-L-fucosidase) id=3939306 bin=GWC2_Bacteroidetes_40_22 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
13_1_40cm_4_scaffold_3512_17
unknown

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comp(13808..14149)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_3512_18
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(14158..15492)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7AF3E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC69942.1}; TaxID=1435056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes TP8.;"
Displaying 18 items

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