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13_1_40cm_4_scaffold_412

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_412_1
unknown

Not on your lists

comp(2..163)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_412_2
unknown

Not on your lists

comp(339..1040)
DNA (702bp) protein (234aa)

This feature has no annotations

13_1_40cm_4_scaffold_412_3
unknown

Not on your lists

1137..1502
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_412_4
unknown

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1477..1740
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_412_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(1966..3330)
DNA (1365bp) protein (455aa)
Fervidolysin. Serine peptidase. MEROPS family S08A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022I7_SOLUE
fervidolysin
Fervidolysin. Serine peptidase. MEROPS family S08A {ECO:0000313|EMBL:ABJ84113.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candi
13_1_40cm_4_scaffold_412_6
unknown

Not on your lists

comp(3408..4244)
DNA (837bp) protein (279aa)

This feature has no annotations

13_1_40cm_4_scaffold_412_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4337..4630)
DNA (294bp) protein (98aa)
Transposase IS116/IS110/IS902 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIB6_KORVE
transposase IS116/IS110/IS902 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
transposase IS116/IS110/IS902
13_1_40cm_4_scaffold_412_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(4630..5031)
DNA (402bp) protein (134aa)
Transposase IS116/IS110/IS902 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIB6_KORVE
transposase IS116/IS110/IS902 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
transposase IS116/IS110/IS902
13_1_40cm_4_scaffold_412_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5254..6933)
DNA (1680bp) protein (560aa)
putative alternative thymidylate synthase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
putative alternative thymidylate synthase id=5802646 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
putative alternative thymidylate synthase
13_1_40cm_4_scaffold_412_10

Not on your lists


comp(6951..7184)
DNA (234bp) protein (78aa)
Ribosomal protein L31 n=1 Tax=mine drainage metagenome RepID=E6QL69_9ZZZZ
Ribosomal protein L31 {ECO:0000313|EMBL:CBI07989.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpmE; 50S ribosomal protein L31
13_1_40cm_4_scaffold_412_11
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(7378..7884)
DNA (507bp) protein (169aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J0F3_FRASU
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=RBG_16_Chloroflexi_56_8_curated
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
13_1_40cm_4_scaffold_412_12
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8045..9334)
DNA (1290bp) protein (430aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UNN9_9LEPT
diguanylate cyclase Tax=CG_Desulfovib_01
GAF sensor-containing diguanylate cyclase
13_1_40cm_4_scaffold_412_13
unknown

Not on your lists

comp(9600..9950)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_412_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

10254..11465
DNA (1212bp) protein (404aa)
Histidine kinase,HAMP domain-containing protein,histidine kinase n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A6Q9_DESDJ
two-component system sensory histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
histidine kinase
13_1_40cm_4_scaffold_412_15
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

11495..12952
DNA (1458bp) protein (486aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ16_KORVE
Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Fis family transcriptional regulator
13_1_40cm_4_scaffold_412_16
unknown

Not on your lists

comp(12992..13300)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_4_scaffold_412_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13311..13586
DNA (276bp) protein (92aa)
Type IV pilus assembly PilZ n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ24_KORVE
type IV pilus assembly PilZ Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
type IV pilus assembly PilZ
13_1_40cm_4_scaffold_412_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

13751..14185
DNA (435bp) protein (145aa)
hypothetical protein id=14425654 bin=bin1_lowGC species=Spirosoma panaciterrae genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein Tax=CSP1_2_Dadabacteria
putative signal transduction protein with CBS domains
13_1_40cm_4_scaffold_412_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14486..15559
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B7C46
Fis family transcriptional regulator; K02584 Nif-specific regulatory protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
two component sigma-54 specific Fis family transcriptional regulator
13_1_40cm_4_scaffold_412_20
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15947..17383
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P409_9BACT
Immunoglobulin I-set domain-containing protein {ECO:0000313|EMBL:KEF37651.1}; Flags: Fragment;; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacil
hypothetical protein
Displaying 20 items

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