ggKbase home page

13_1_40cm_4_scaffold_4158

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4158_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1..1290
DNA (1290bp) protein (430aa)
Tetratricopeptide repeat domain protein n=1 Tax=uncultured planctomycete RepID=H5SEA3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_4_scaffold_4158_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1415..2818
DNA (1404bp) protein (468aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKP7_KORVE
Uncharacterized protein {ECO:0000313|EMBL:CDM64889.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_4_scaffold_4158_3
unknown

Not on your lists

2793..2891
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_4_scaffold_4158_4
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2973..3569
DNA (597bp) protein (199aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J0U6_9GAMM
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
13_1_40cm_4_scaffold_4158_5
unknown

Not on your lists

comp(4087..4260)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_4_scaffold_4158_6
unknown

Not on your lists

comp(4414..4695)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_4_scaffold_4158_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4941..7142
DNA (2202bp) protein (734aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E7DF8
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:CDM65938.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas
TonB-dependent receptor
13_1_40cm_4_scaffold_4158_8
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7166..9760)
DNA (2595bp) protein (865aa)
glnD; protein-P-II uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3D2_ACIC5
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
13_1_40cm_4_scaffold_4158_9
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9868..10206)
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000364C08A
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ADW69311.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (st
13_1_40cm_4_scaffold_4158_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10296..11714)
DNA (1419bp) protein (473aa)
ammonia channel protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4CDAB
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_4_scaffold_4158_11
unknown

Not on your lists

comp(11871..12314)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_4_scaffold_4158_12
unknown

Not on your lists

comp(12699..13286)
DNA (588bp) protein (196aa)

This feature has no annotations

Displaying 12 items

View Taxonomy