ggKbase home page

13_1_40cm_4_scaffold_4173

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4173_1
unknown

Not on your lists

comp(107..382)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_4173_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

843..1511
DNA (669bp) protein (223aa)
peptidase M50 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Zn-dependent protease id=2964357 bin=GWC2_Nitrospirae_57_13 species=Methylophaga lonarensis genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
peptidase M50
13_1_40cm_4_scaffold_4173_3
unknown

Not on your lists

1694..2002
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_4_scaffold_4173_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

2441..3874
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003671E64
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
putative transcriptional regulatory protein ZraR
13_1_40cm_4_scaffold_4173_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4474..5088
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6Y6_NIAKG
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_4173_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5230..5919)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILX9_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42121.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_4_scaffold_4173_7

Not on your lists

6253..6768
DNA (516bp) protein (172aa)
Anti-ECF sigma factor ChrR n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FNT9_9RHIZ
Cupin domain protein {ECO:0000313|EMBL:AIA10621.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_4_scaffold_4173_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7276..9000
DNA (1725bp) protein (575aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
DNA polymerase III, tau subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ74_KORVE
DNA polymerase III subunits gamma and tau
13_1_40cm_4_scaffold_4173_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9027..9353
DNA (327bp) protein (109aa)
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein; K09747 hypothetical protein id=12556304 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_4_scaffold_4173_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9388..10299)
DNA (912bp) protein (304aa)
Peptidase M48, Ste24p n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU37_KORVE
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABF39613.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_4_scaffold_4173_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10296..12230)
DNA (1935bp) protein (645aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU38_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39612.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_4_scaffold_4173_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12185..14461)
DNA (2277bp) protein (759aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU38_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39612.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_4_scaffold_4173_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14705..15304
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RECR_KORVE
recR; recombination protein RecR
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_4_scaffold_4173_14
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15568..15903
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037A33A2
Permease {ECO:0000313|EMBL:KEO81063.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
permease
13_1_40cm_4_scaffold_4173_15
Eimeria maxima, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

15958..18741
DNA (2784bp) protein (928aa)
Uncharacterized protein n=1 Tax=Eimeria maxima RepID=U6MHA8_EIMMA
SpoVK; ATPase
Uncharacterized protein {ECO:0000313|EMBL:CDJ61849.1}; TaxID=5804 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria
Displaying 15 items

View Taxonomy