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13_1_40cm_4_scaffold_5225

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5225_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(3..713)
DNA (711bp) protein (237aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000255|HAMAP-Rule:MF_00182}; EC=2.1.2.9 {ECO:0000255|HAMAP-Rule:MF_00182};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibact
Methionyl-tRNA formyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=FMT_SOLUE
13_1_40cm_4_scaffold_5225_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(714..1301)
DNA (588bp) protein (196aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Peptide deformylase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NT04_GRAMM
peptide deformylase
13_1_40cm_4_scaffold_5225_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(1276..2445)
DNA (1170bp) protein (390aa)
chorismate synthase (EC:4.2.3.5) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=AROC_SOLUE
13_1_40cm_4_scaffold_5225_4
unknown

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comp(2679..3017)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_5225_5
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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3288..4130
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMK9_KORVE
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_40cm_4_scaffold_5225_6
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4208..5047
DNA (840bp) protein (280aa)
ABC transporter related protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V5P9_TERSS
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADV82658.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain
13_1_40cm_4_scaffold_5225_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5090..6172
DNA (1083bp) protein (361aa)
Mammalian cell entry related domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BI0_SOLUE
hypothetical protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ABJ81586.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source
13_1_40cm_4_scaffold_5225_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6275..7036
DNA (762bp) protein (254aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=320771 species="Bacteria; Verrucomicrobia; Ver
Thymidylate kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMF1_9BACT
thymidylate kinase
13_1_40cm_4_scaffold_5225_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7039..7881
DNA (843bp) protein (281aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=351605 species="Bacteria; Proteobacteria; Delt
Thymidylate kinase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4V0_GEOUR
thymidylate kinase
13_1_40cm_4_scaffold_5225_10
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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7890..9434
DNA (1545bp) protein (515aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Ppx/GppA phosphatase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LW87_HALO1
Ppx/GppA phosphatase
13_1_40cm_4_scaffold_5225_11
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(10411..11211)
DNA (801bp) protein (267aa)
Ppx/GppA phosphatase (EC:3.6.1.40)
Ppx/GppA phosphatase family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WLV1_9SYNE
Ppx/GppA phosphatase family {ECO:0000313|EMBL:EDX87690.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
13_1_40cm_4_scaffold_5225_12
unknown

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comp(11162..11878)
DNA (717bp) protein (239aa)
hypothetical protein
13_1_40cm_4_scaffold_5225_13
unknown

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comp(12003..12953)
DNA (951bp) protein (317aa)

This feature has no annotations

13_1_40cm_4_scaffold_5225_trna_1
unknown

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13136..13220
DNA (85bp)
transferRNA
13_1_40cm_4_scaffold_5225_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13607..15133
DNA (1527bp) protein (509aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP88_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41312.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_4_scaffold_5225_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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15359..16309
DNA (951bp) protein (317aa)
glycoside hydrolase family protein; K15855 exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165] Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B1D36
glycoside hydrolase
Displaying 16 items

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