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13_1_40cm_4_scaffold_5330

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5330_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..836)
DNA (834bp) protein (278aa)
Extracellular repeat protein, HAF family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J0C9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH45737.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
13_1_40cm_4_scaffold_5330_2
unknown

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1129..1374
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_5330_3
unknown

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comp(1400..1990)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_4_scaffold_5330_4
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2005..2484)
DNA (480bp) protein (160aa)
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella mult
secD; putative preprotein translocase SecD subunit; K03072 preprotein translocase subunit SecD
13_1_40cm_4_scaffold_5330_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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2964..3239
DNA (276bp) protein (92aa)
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_40cm_4_scaffold_5330_6
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3421..5244
DNA (1824bp) protein (608aa)
TonB-dependent receptor plug n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3F2_TERSS
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADV83565.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATC
13_1_40cm_4_scaffold_5330_7
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5201..6769
DNA (1569bp) protein (523aa)
TonB-dependent receptor plug n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WY39_ACISM
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADW67578.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain
13_1_40cm_4_scaffold_5330_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(6811..7422)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP3_9BACT
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tonB-dependent receptor plug domain protein
13_1_40cm_4_scaffold_5330_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(7462..10548)
DNA (3087bp) protein (1029aa)
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
TonB-dependent receptor id=12556886 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-dependent receptor
13_1_40cm_4_scaffold_5330_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(11157..11600)
DNA (444bp) protein (148aa)
Transcription termination factor NusG domain protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJ95_THEYD
transcription antitermination protein nusG Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
transcription termination factor NusG domain-containing protein
13_1_40cm_4_scaffold_5330_11
unknown

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comp(11672..11905)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_4_scaffold_5330_12
unknown

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comp(12396..13073)
DNA (678bp) protein (226aa)

This feature has no annotations

13_1_40cm_4_scaffold_5330_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(13086..13415)
DNA (330bp) protein (110aa)
Putative transposase orfA for insertion sequence element id=3776055 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transposase orfA for insertion sequence element Tax=GWA2_Rokubacteria_70_23_curated
putative transposase orfA for insertion sequence element
13_1_40cm_4_scaffold_5330_14
unknown

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14133..14879
DNA (747bp) protein (249aa)

This feature has no annotations

13_1_40cm_4_scaffold_5330_15
unknown

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14929..15408
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_40cm_4_scaffold_5330_16
unknown

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15408..15632
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 16 items

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