ggKbase home page

13_1_40cm_4_scaffold_6009

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6009_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(35..775)
DNA (741bp) protein (247aa)
DNA repair protein RecO n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1J2_ACIC5
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
recO; DNA repair protein RecO
13_1_40cm_4_scaffold_6009_2
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

1241..1897
DNA (657bp) protein (219aa)
rhomboid family protein Tax=GWA2_RIF03_38_11_curated
Putative rhomboid serine protease id=4285486 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
rhomboid-like protein
13_1_40cm_4_scaffold_6009_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1937..2998)
DNA (1062bp) protein (354aa)
isocitrate dehydrogenase (EC:1.1.1.41) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
3-isopropylmalate dehydrogenase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZ05_PYRAB
leuB-1; 3-isopropylmalate dehydrogenase
13_1_40cm_4_scaffold_6009_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3159..5081)
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037F2EBC
serine/threonin protein kinase
Serine/threonine protein kinase with TPR repeats {ECO:0000313|EMBL:ABJ84784.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_1_40cm_4_scaffold_6009_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5247..6221)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020J4_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_40cm_4_scaffold_6009_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6226..7296)
DNA (1071bp) protein (357aa)
mandelate racemase/muconate lactonizing enzyme; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
O-succinylbenzoate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPL2_KORVE
O-succinylbenzoate synthase
13_1_40cm_4_scaffold_6009_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7354..8094)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW7_KORVE
N-acetyltransferase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_6009_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8091..9032)
DNA (942bp) protein (314aa)
MazG family protein (EC:3.6.1.19)
MazG family protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIF5_CHLTF
MazG family protein; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_4_scaffold_6009_9
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

9174..9656
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDZ9_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11061.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
13_1_40cm_4_scaffold_6009_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9714..11600
DNA (1887bp) protein (629aa)
Beta-lactamase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027I3_SOLUE
beta-lactamase-like; K06167 PhnP protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
beta-lactamase domain-containing protein
13_1_40cm_4_scaffold_6009_11

Not on your lists

11653..12276
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL47440.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_6009_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

12479..12847
DNA (369bp) protein (123aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020R5_SOLUE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ84574.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;
13_1_40cm_4_scaffold_6009_13
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12988..13311
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Uncharacterized protein id=1843360 bin=GWA2_Elusimicrobia_66_18 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
CopG family transcriptional regulator
13_1_40cm_4_scaffold_6009_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

13320..13613
DNA (294bp) protein (98aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Rhizobium sp. CF142 RepID=J1T6J0_9RHIZ
addiction module antitoxin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
toxin Y4kP
13_1_40cm_4_scaffold_6009_15
unknown

Not on your lists

comp(13550..13687)
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_4_scaffold_6009_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13857..14102
DNA (246bp) protein (82aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020R5_SOLUE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ84574.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;
13_1_40cm_4_scaffold_6009_17
unknown

Not on your lists

14368..15060
DNA (693bp) protein (231aa)

This feature has no annotations

Displaying 17 items

View Taxonomy