ggKbase home page

13_1_40cm_4_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_65_1
unknown

Not on your lists

1..99
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_4_scaffold_65_2
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(150..1199)
DNA (1050bp) protein (350aa)
Glycosyl transferase family 2 n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XED6_9CHRO
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFZ30995.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
13_1_40cm_4_scaffold_65_3
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1196..1987)
DNA (792bp) protein (264aa)
Glycosyl transferase family 2 n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VN82_9CYAN
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFZ08680.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis P
13_1_40cm_4_scaffold_65_4
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(2005..3222)
DNA (1218bp) protein (406aa)
ABC transporter-like protein; K09691 lipopolysaccharide transport system ATP-binding protein Tax=RBG_16_Chloroflexi_64_43_curated
ABC transporter-like protein; K09691 lipopolysaccharide transport system ATP-binding protein id=12556214 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter
13_1_40cm_4_scaffold_65_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3448..4323)
DNA (876bp) protein (292aa)
ABC-2 type transporter n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XL6_SOLUE
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter us
13_1_40cm_4_scaffold_65_6
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4480..5907)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F3R6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFK09530.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hypothetical protein
13_1_40cm_4_scaffold_65_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6052..7737)
DNA (1686bp) protein (562aa)
Serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPI0_KORVE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABF41220.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_1_40cm_4_scaffold_65_8
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7926..8708)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X6I6_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW71070.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tund
13_1_40cm_4_scaffold_65_9
unknown

Not on your lists

comp(8692..8874)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_4_scaffold_65_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(8858..10705)
DNA (1848bp) protein (616aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AG1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81961.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_4_scaffold_65_11
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(10976..11983)
DNA (1008bp) protein (336aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQ59_ROSCS
nucleoside-diphosphate-sugar epimerase Tax=RBG_16_Planctomycetes_43_13_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_65_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11993..13498)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIF0_9BACT
Protein-tyrosine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Protein-tyrosine kinase
13_1_40cm_4_scaffold_65_13
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13467..14303)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIF0_9BACT
Protein-tyrosine kinase Tax=RBG_13_Nitrospirae_41_22_curated
Protein-tyrosine kinase
13_1_40cm_4_scaffold_65_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(14307..15473)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000378F7ED
hypothetical protein; K01991 polysaccharide export outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_4_scaffold_65_15
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15525..16790)
DNA (1266bp) protein (422aa)
O-antigen polymerase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0Y8_GRAMM
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:AEU35835.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensi
13_1_40cm_4_scaffold_65_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(16787..18085)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIF1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_40cm_4_scaffold_65_17
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18410..20272
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034BB89D
asparagine synthase
Asparagine synthase {ECO:0000313|EMBL:ACL43412.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 291
13_1_40cm_4_scaffold_65_18
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20633..21562
DNA (930bp) protein (310aa)
HPr kinase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HXX2_CYAP4
HPr kinase
HPr kinase {ECO:0000313|EMBL:ACL43411.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
13_1_40cm_4_scaffold_65_19
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21846..25379
DNA (3534bp) protein (1178aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKR5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62310.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
13_1_40cm_4_scaffold_65_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25491..26672)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W6L3_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETX07419.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_4_scaffold_65_21
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(26970..28442)
DNA (1473bp) protein (491aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL93_KORVE
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Fis family transcriptional regulator
13_1_40cm_4_scaffold_65_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(28435..31254)
DNA (2820bp) protein (940aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
Multi-sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL92_KORVE
multi-sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_65_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(31439..33190)
DNA (1752bp) protein (584aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILC8_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42322.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_4_scaffold_65_24
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(33197..34897)
DNA (1701bp) protein (567aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028Q1_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_4_scaffold_65_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(35148..35435)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036AAD0C
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_65_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

35693..36310
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPV8_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41092.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_65_27
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

36533..37003
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NX73_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU36687.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
13_1_40cm_4_scaffold_65_28
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

37221..37625
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3K0_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO33341.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_1_40cm_4_scaffold_65_29
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

37687..38214
DNA (528bp) protein (176aa)
C39 family peptidase (EC:3.4.-.-)
Peptidase, C39 family {ECO:0000313|EMBL:ACO32872.1}; EC=3.4.-.- {ECO:0000313|EMBL:ACO32872.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" so
Peptidase, C39 family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3K1_ACIC5
13_1_40cm_4_scaffold_65_30
unknown

Not on your lists

comp(38559..39194)
DNA (636bp) protein (212aa)

This feature has no annotations

Displaying items 1-30 of 66 in total

View Taxonomy