ggKbase home page

13_1_40cm_4_scaffold_6863

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6863_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1..699
DNA (699bp) protein (233aa)
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:ABF41573.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABF41573.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidat
Succinate dehydrogenase subunit B n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INH7_KORVE
sdhB; succinate dehydrogenase iron-sulfur subunit
13_1_40cm_4_scaffold_6863_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1239..1994
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INH2_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41578.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_4_scaffold_6863_3
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2184..3452
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B0EAB
Membrane dipeptidase {ECO:0000313|EMBL:AKF87126.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcu
M19 family peptidase
13_1_40cm_4_scaffold_6863_4
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3685..4416
DNA (732bp) protein (244aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Ac
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037D5A97
Peptidylprolyl isomerase
13_1_40cm_4_scaffold_6863_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4499..5026
DNA (528bp) protein (176aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Ac
peptidylprolyl isomerase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035D2B57
peptidyl-prolyl cis-trans isomerase, cyclophilin-type
13_1_40cm_4_scaffold_6863_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5156..6082)
DNA (927bp) protein (309aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=204669 species="Bacteria; Ac
Malate dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ98_KORVE
malate dehydrogenase
13_1_40cm_4_scaffold_6863_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6221..7648)
DNA (1428bp) protein (476aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candi
Isocitrate dehydrogenase [NADP] n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ99_KORVE
isocitrate dehydrogenase
13_1_40cm_4_scaffold_6863_8
Acidobacteriaceae bacterium KBS 83, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8171..8533
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037FC4D6
13_1_40cm_4_scaffold_6863_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8480..11449)
DNA (2970bp) protein (990aa)
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365DEB1
glutamate-ammonia-ligase adenylyltransferase
13_1_40cm_4_scaffold_6863_10
unknown

Not on your lists

11582..12049
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_40cm_4_scaffold_6863_11
unknown

Not on your lists

comp(12071..12634)
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_4_scaffold_6863_12
unknown

Not on your lists

12954..13277
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_4_scaffold_6863_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13544..14956)
DNA (1413bp) protein (471aa)
L-glutamine synthetase (EC:6.3.1.2)
L-glutamine synthetase {ECO:0000313|EMBL:ABJ81083.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ABJ81083.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatu
glutamine synthetase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370553F
13_1_40cm_4_scaffold_6863_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15370..16302
DNA (933bp) protein (311aa)
Transcriptional regulator, LysR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQA4_KORVE
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABF40946.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
Displaying 14 items

View Taxonomy