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13_1_40cm_4_scaffold_7128

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7128_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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322..783
DNA (462bp) protein (154aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUG0_KORVE
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ABF39490.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
13_1_40cm_4_scaffold_7128_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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874..2142
DNA (1269bp) protein (423aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=204669 species="Bacteria
Cysteine desulfurase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUG1_KORVE
class V aminotransferase
13_1_40cm_4_scaffold_7128_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2205..2618
DNA (414bp) protein (138aa)
FeS cluster assembly scaffold IscU n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUG2_KORVE
scaffold protein
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:ABF39488.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_1_40cm_4_scaffold_7128_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2752..3072
DNA (321bp) protein (107aa)
HesB/YadR/YfhF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUG3_KORVE
HesB/YadR/YfhF
HesB/YadR/YfhF {ECO:0000313|EMBL:ABF39487.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin34
13_1_40cm_4_scaffold_7128_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3323..3988
DNA (666bp) protein (222aa)
Heat shock protein DnaJ-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUG4_KORVE
molecular chaperone DnaJ
Heat shock protein DnaJ-like protein {ECO:0000313|EMBL:ABF39486.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
13_1_40cm_4_scaffold_7128_6
unknown

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comp(4054..4494)
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_4_scaffold_7128_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4630..5097)
DNA (468bp) protein (156aa)
NAD-specific glutamate dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXL2_9SPHN
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:ENY83155.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="S
NAD-specific glutamate dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_7128_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6121..6534
DNA (414bp) protein (138aa)
Ferredoxin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUG6_KORVE
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABF39484.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;
13_1_40cm_4_scaffold_7128_9
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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6658..6879
DNA (222bp) protein (74aa)
Protein iscX n=1 Tax=mine drainage metagenome RepID=E6QKZ0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KER09491.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
iscX; FeS assembly protein IscX
13_1_40cm_4_scaffold_7128_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6968..8008)
DNA (1041bp) protein (347aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:ABF39348.1}; EC=2.7.7.12 {ECO:0000313|EMBL:ABF39348.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
Galactose-1-phosphate uridylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUV2_KORVE
galactose-1-phosphate uridylyltransferase
13_1_40cm_4_scaffold_7128_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8051..8497)
DNA (447bp) protein (149aa)
UPF0102 protein Acid345_3985 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Y3985_KORVE
hypothetical protein
UPF0102 protein Acid345_3985 {ECO:0000255|HAMAP-Rule:MF_00048}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_1_40cm_4_scaffold_7128_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(8708..9049)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QD0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88140.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_4_scaffold_7128_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9245..9970)
DNA (726bp) protein (242aa)
Phosphate uptake regulator, PhoU n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMC3_KORVE
phosphate uptake regulator PhoU
Phosphate uptake regulator, PhoU {ECO:0000313|EMBL:ABF41977.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_1_40cm_4_scaffold_7128_14
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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10253..10459
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_1_40cm_4_scaffold_7128_15
unknown

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comp(10570..10887)
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying 15 items

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