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13_1_40cm_4_scaffold_174_2

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: comp(1174..1506)

Top 3 Functional Annotations

Value Algorithm Source
PspC domain protein n=1 Tax=Streptococcus mitis SK575 RepID=I0SZ16_STRMT similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 59.0
  • Bit_score: 94
  • Evalue 9.40e-17
two-component system, sensory transduction histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 97.0
  • Bit_score: 102
  • Evalue 3.70e-19
PspC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 58.0
  • Bit_score: 89
  • Evalue 8.40e-16

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Taxonomy

R_Acidobacteria_67_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGATCTGCCCTAATTGCCAAAAAGACATCGCCATCGGTTCGAAGTTTTGCTACAACTGCGGCGCGAAGCAGCCGGAAACGCCCGCGCCGGGCTTCTCGCCACAAACTGGCGGCAAGAAAAAGCTGATGCGTTCGTCCACGGACAAGAAAATTGCCGGCGTATGCGCTGGCCTTGCCGACTATTTTGACATGGATCCCACGGTCATCCGAGTGCTCTGGCTGCTGGCTGTCCTTTGCTTTGGCACCGGCTTGTTCGCTTACATCATTCTGTGGATTGTTCTGCCTTTGGCGCCAGCAGGGGTAATTCCAACCTCAGCGACGGCCGCCTCCTAG
PROTEIN sequence
Length: 111
MICPNCQKDIAIGSKFCYNCGAKQPETPAPGFSPQTGGKKKLMRSSTDKKIAGVCAGLADYFDMDPTVIRVLWLLAVLCFGTGLFAYIILWIVLPLAPAGVIPTSATAAS*