ggKbase home page

13_1_40cm_4_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_174_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1..1167
DNA (1167bp) protein (389aa)
Oligopeptidase B {ECO:0000313|EMBL:ABF41329.1}; EC=3.4.21.83 {ECO:0000313|EMBL:ABF41329.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Oligopeptidase B n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP71_KORVE
oligopeptidase B
13_1_40cm_4_scaffold_174_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1174..1506)
DNA (333bp) protein (111aa)
PspC domain protein n=1 Tax=Streptococcus mitis SK575 RepID=I0SZ16_STRMT
two-component system, sensory transduction histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PspC family transcriptional regulator
13_1_40cm_4_scaffold_174_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(1607..3763)
DNA (2157bp) protein (719aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit beta (EC:1.2.4.4)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit {ECO:0000313|EMBL:AEP12697.1}; EC=1.2.4.4 {ECO:0000313|EMBL:AEP12697.1};; TaxID=981222 specie
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHN3_CHLTF
13_1_40cm_4_scaffold_174_4
unknown

Not on your lists

comp(3935..4429)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_4_scaffold_174_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5053..7287
DNA (2235bp) protein (745aa)
TonB-dependent receptor n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3A3_ACIC5
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACO32604.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_1_40cm_4_scaffold_174_6
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

7613..8806
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037643D5
major facilitator superfamily permease Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
MFS transporter
13_1_40cm_4_scaffold_174_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8911..10461
DNA (1551bp) protein (517aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AZ8_SOLUE
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ABJ81768.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
13_1_40cm_4_scaffold_174_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10458..11378
DNA (921bp) protein (307aa)
yprA; nucleotidyltransferase (EC:2.7.7.-)
DEAD/DEAH box helicase; K06877 DEAD/DEAH box helicase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
DEAD/DEAH box helicase; K06877 DEAD/DEAH box helicase domain-containing protein id=12555802 bin=CNBR_ACIDO species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_4_scaffold_174_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11379..12743
DNA (1365bp) protein (455aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PZ8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88272.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_4_scaffold_174_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12553..14040)
DNA (1488bp) protein (496aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIV6_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM64303.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_4_scaffold_174_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

14245..15027
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FDFC7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_40cm_4_scaffold_174_12
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(14963..15412)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003767D78
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_40cm_4_scaffold_174_13
unknown

Not on your lists

15955..16743
DNA (789bp) protein (263aa)

This feature has no annotations

13_1_40cm_4_scaffold_174_14
unknown

Not on your lists

17043..17318
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_174_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17286..20363)
DNA (3078bp) protein (1026aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABF41498.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABF41498.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INQ2_KORVE
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_174_16
unknown

Not on your lists

comp(20312..20470)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_174_17
unknown

Not on your lists

20735..20860
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_4_scaffold_174_18
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20980..22059
DNA (1080bp) protein (360aa)
Response regulator n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F424_ACIC5
response regulator
Response regulator {ECO:0000313|EMBL:ACO34184.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 5
13_1_40cm_4_scaffold_174_19
unknown

Not on your lists

22163..22528
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_174_20
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22525..23505)
DNA (981bp) protein (327aa)
TonB-dependent receptor plug n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X5N2_ACISM
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADW70659.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella
13_1_40cm_4_scaffold_174_21
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(23539..25911)
DNA (2373bp) protein (791aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037A8AE8
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADW70659.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella
13_1_40cm_4_scaffold_174_22
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(25913..26236)
DNA (324bp) protein (108aa)
TonB-denpendent receptor n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5F932
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADW70659.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella
13_1_40cm_4_scaffold_174_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(26497..27657)
DNA (1161bp) protein (387aa)
Aminotransferase {ECO:0000313|EMBL:ABF41289.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABF41289.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
Aminotransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPB1_KORVE
aminotransferase
13_1_40cm_4_scaffold_174_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

27749..28888
DNA (1140bp) protein (380aa)
DegT/DnrJ/EryC1/StrS family protein id=14627076 bin=bin7_NC10_sister species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
DegT/DnrJ/EryC1/StrS family protein Tax=CSP1_6_Rokubacteria
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
13_1_40cm_4_scaffold_174_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(28905..29582)
DNA (678bp) protein (226aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Cytochrome c oxidase, subunit III n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX7_SOLUE
cytochrome c oxidase subunit III
13_1_40cm_4_scaffold_174_26
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(29596..31293)
DNA (1698bp) protein (566aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome-c oxidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX8_SOLUE
13_1_40cm_4_scaffold_174_27
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31507..31845
DNA (339bp) protein (113aa)
Putative phage immunity protein putative membrane protein n=1 Tax=Pseudomonas brassicacearum (strain NFM421) RepID=F2KJI7_PSEBN
phage immunity protein; membrane protein
Putative phage immunity protein putative membrane protein {ECO:0000313|EMBL:AEA70213.1}; TaxID=994484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudom
13_1_40cm_4_scaffold_174_28
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(31938..32927)
DNA (990bp) protein (330aa)
Inosine-uridine preferring nucleoside hydrolase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F2J3_ACIC5
inosine-uridine preferring nucleoside hydrolase family protein
Inosine-uridine preferring nucleoside hydrolase family protein {ECO:0000313|EMBL:ACO31932.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" sour
13_1_40cm_4_scaffold_174_29
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

33052..33438
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027G8_SOLUE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ82845.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;
13_1_40cm_4_scaffold_174_trna_2
unknown

Not on your lists

comp(33546..33629)
DNA (84bp)
transferRNA
Displaying items 1-30 of 50 in total

View Taxonomy