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13_1_40cm_4_scaffold_2328_1

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: 304..888

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase n=1 Tax=Paenibacillus elgii RepID=UPI000248DF4F similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 177.0
  • Bit_score: 116
  • Evalue 3.10e-23
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 177.0
  • Bit_score: 116
  • Evalue 3.30e-23
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 187.0
  • Bit_score: 111
  • Evalue 2.10e-22

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Taxonomy

Paenibacillus sp. MSt1 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 585
ATGAACGCGCCGGGAATAACGGAGCCGACGGAGGCGATTGCCCGTGCCAGGGCGGGTGACGCGGAGGCTTGGGGCGAGCTTTACCGGGAGTATGCGCCGGCGATTTTCCGGTTCTGCCGGCGTGCGTTGCCGACTCGGGAAGACGCCGAAGACGCCACCATGGAAATTTTCATGAAACTGCGCGGCAAGTTGCACCAATACGACACGACGCGGTCGTTTTCGGCGTGGCTATACAAAGTGTCGGCAAATCATTGCTGGGACATTTTGCGGCGGCGGAAAATCCGCCAGGATAAAGAAACCGAAGACGTCGAGAATATGCCGCTGGAGCATCCTGAACCGAGCCAACTGGAAAAGCTGATCGAGCAGCGATCGAGTGAAGAAGTGCGCAAGGCGCTGGACAAACTGGGCGCGCGGGCGCGCATGGCGCTGGTGATGCGCTATTACTCAGACATGAGCTACGACGAAATTGCCGATGCGCTAGGTGTGCGGCGCGCCTTTGTGGGCGTGGTGCTGCTACGAGCGCGGCACGAACTGCGGCAAGCACTGGAAGGCAGCGCGGTGCTGGCCGCGGGAGGGACTTCATGA
PROTEIN sequence
Length: 195
MNAPGITEPTEAIARARAGDAEAWGELYREYAPAIFRFCRRALPTREDAEDATMEIFMKLRGKLHQYDTTRSFSAWLYKVSANHCWDILRRRKIRQDKETEDVENMPLEHPEPSQLEKLIEQRSSEEVRKALDKLGARARMALVMRYYSDMSYDEIADALGVRRAFVGVVLLRARHELRQALEGSAVLAAGGTS*