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13_1_40cm_4_scaffold_2328

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2328_1
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

304..888
DNA (585bp) protein (195aa)
RNA polymerase n=1 Tax=Paenibacillus elgii RepID=UPI000248DF4F
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_4_scaffold_2328_2
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

885..2585
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C528_SPHTD
hypothetical protein Tax=RBG_13_Chloroflexi_50_10_curated
hypothetical protein
13_1_40cm_4_scaffold_2328_3
unknown

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comp(2754..4268)
DNA (1515bp) protein (505aa)

This feature has no annotations

13_1_40cm_4_scaffold_2328_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

4589..6652
DNA (2064bp) protein (688aa)
helicase c2; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Helicase c2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHL6_KORVE
helicase c2
13_1_40cm_4_scaffold_2328_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6706..7086
DNA (381bp) protein (127aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; S
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A87_SOLUE
6-pyruvoyl tetrahydrobiopterin synthase
13_1_40cm_4_scaffold_2328_6
unknown

Not on your lists

7111..7299
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_2328_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

7359..8054
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000369E91E
radical SAM family Fe-S protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
radical SAM protein
13_1_40cm_4_scaffold_2328_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8079..8795
DNA (717bp) protein (239aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase id=4734687 bin=GWC2_Deltaproteobacteria_55_46 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
queuosine biosynthesis protein QueC
13_1_40cm_4_scaffold_2328_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

8983..9993
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3119B
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_4_scaffold_2328_10
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

10269..10574
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QLE2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY58409.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
13_1_40cm_4_scaffold_2328_11
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10549..11013
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034CDFF4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY57878.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
13_1_40cm_4_scaffold_2328_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(11173..12243)
DNA (1071bp) protein (357aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UK0_SOLUE
PDZ/DHR/GLGF Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PDZ/DHR/GLGF domain-containing protein
13_1_40cm_4_scaffold_2328_13
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

comp(12291..13061)
DNA (771bp) protein (257aa)
hypothetical protein Tax=RBG_13_Aminicenantes_59_9_curated
hypothetical protein id=24432907 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_4_scaffold_2328_14
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13143..14945)
DNA (1803bp) protein (601aa)
Putative uncharacterized protein id=5026854 bin=GWA2_Ignavibacteria_55_11 species=Colwellia psychrerythraea genus=Colwellia taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
peptidase S7
13_1_40cm_4_scaffold_2328_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15000..16094)
DNA (1095bp) protein (365aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
transmembrane anti-sigma factor id=721095 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
transmembrane anti-sigma factor
13_1_40cm_4_scaffold_2328_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16091..16768)
DNA (678bp) protein (226aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UK3_SOLUE
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_4_scaffold_2328_17
unknown

Not on your lists

comp(16978..18195)
DNA (1218bp) protein (406aa)

This feature has no annotations

Displaying 17 items

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