ggKbase home page

13_1_40cm_4_scaffold_316_7

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: comp(4334..7288)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box Tax=RBG_13_Deltaproteobacteria_43_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 630.0
  • Bit_score: 349
  • Evalue 1.50e-92
Putative Hybrid sensor histidine kinase id=2745675 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome similarity UNIREF
DB: UNIREF100
  • Identity: 32.2
  • Coverage: 624.0
  • Bit_score: 289
  • Evalue 1.00e-74
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 676.0
  • Bit_score: 288
  • Evalue 6.50e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Deltaproteobacteria_43_22_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2955
ATGAACGAGCTACGAGAGTTCTTCTCCTCCAGGGGTTTCATGCCCCACGGTTTTTGCTACCAATGGAAGCCGCTTCTTATTTGGCTACACGGCATTTCCGACACTTTGATAGCCATTGCCTATTTCTCGATTCCTCTCGCCTTGATCTATTTAGTGAGAAAAAAGCGAAATATTCCGTTTGACTGGATGTTCGTATGCTTTGGAACGTTCATCGCCGCCTGTGCAGCAACCCATCTCATGGAAGTAGTGACGCTTTGGATCCCCGTCTACTGGATCTCCGGTGGAGTGAAGGTAATCGCAGCTCTTGCCTCGTTACCCACCGCCATCTTGCTTACTCGCGTCGTTCCCCAAGTTCTTAACTTACCCAGCCCCGATGATCTCCGGTCTGCAAACCAGGAATTGGGAAGACAAGCGACGATTCTGCGCGAACAAGCTGCTCTCCTGGATCTCTCTCAAGATGCGATTCAGGTCCAGACGATCGACGGAAAAAATCTGCTCTGGAATCAGGGTGCGGAGCGCATGTATGGCTGGTCGAAAGCGGAAGCAATCGGCCAGTTCGATCATGATCTGCTGCAGACGAATTTCGCACGGCCACGGAACGAAATTATCGACAAGCTTCTTGCAACGGGATACTGGGATGGGGAGCTTCAACAGAGGAGGCGCGATGGACAAACGATCATCGTGTCGAGCCGTTGGGCATTGGGGAGGGGTCTGGATGGCAGCGCCCAGAATGTCTTGATGATCGACACTGACATCACGGAGCAAAGGCGCGCGGAAGATGCTATGCGCGAAAGTGAAGAAAGATTCCGGTTAATGGCGGGCAACATCGAAGAGATCTTTTGGCTCTTGGATCCCAGGTCTTTGGGAGTCATTTACGTAAGCCCCGCGTTCGAGCATATCTGTGAGCGGCCCCTGGCCTCTATCTATTCAAACCCTACTTCTTATCGCGAAATCATCCATTCCGAGGACGTCCGGCGAGTGCTCGCACAGCTTGCCCTTCTGGAGCAGACAAACGAATTTCATGAACAGTTTCGCATCGTCTGCCCCTCGGGGACGGTAAAGTGGGTCGAAGGATGGGGTTTCACCGCAAAGGATTCCATTGGGAATGTCACCGCACTCGTTGGAACCGTACGGGACATCACGGAACGCAAGCGGGCAGAGGACGCGGGCCGCCGGAGCGAAGAGCTGCTCCGGGCAGCATTCAACCAGGCCGCCGTGGGGTTTTCGATGACGAATATGCAGGGCCAGTTCGTCAAAGTGAACAGGACTTATTGCCGCATTACCGGTTACTCGGAGGAGGAACTCCTTAAGATGAATTTCCAGTCGATTACTGCTCCGGAGGATCTTCCCGCAAACTTAGTGCGGATGCACCGTCTCGTCGTCGGAGAAATCAGCAACACTGTTTATCAGAAGCGCCATATCAGGAAATCCGGCGAACTTGTCTGGGTCCAGAATAGCGTCTCTCCCTTATGGGATGGCAATGGTAAGGTTTCCGGTTTCGTGGCTCTAACCGAGGATATTACCGATCGCAAGAGAGCGGAAGATGCATTGCGTGAGAGTGAGGATCGCTATCGGGACTTGGTCGAGAATTCCAGTGACCTGATTTGCACGCACGATGCTCAGGGAATTCTCTTGTCTGTTAACGAGACTCCCCTTCGGATTCTCGGATATTCCCGGGAGGAACTCCTGAATAAGCCACTGCGCGACTTTGTCACGCCGGAAACGCGCCCTTTGTGTGATGCCTATCTTGCCCAAGTTCAACGAGACGGTTTCGCCAAAGGCCTCCTGCCTGTCGTGGCCAAGAGCGGAGAAGTGAGGCTCTGGGAATACAATAATTCTCTTCGCAAAGAGGGAGTGAGTTCACCAGTCGTTCGCGGCATCGCGCATGACGTCACCGAACAAAAGCGTGCAGAAGCGGCACTGCGCAGGTCCGAAGAAAAGTTCTCCAAGGCGTTCCGTTCGAGCCCGGTTGAAATGGTCATAACAACACTCGAGGAAGGGCGCTTCTTGGACGCCAACGAAAGCTTTGAAAAAAACACCCGCTTCACCCGGGAGGAGGTCATTGGCCGTACCTCTCTTGAGTTAGGCCTCTGGGTGGACCCGCAGGACAGGGCGGCGGTGGTCGAGGAAATAAAGAAAAACGGCCGGATCGTGAATCGTGAGATTCGGATCCGGGCAAAGTCGGGCGATATTGGTTTCAAGCTCTATTCGGCGGAGCTCATCCAGATAGCCTGTGAGCAATGTTTGCTGGCAGTCAGTGAAGACATCACCCAACGCAAGCGGGCGGCAGAGGGAATCCGGAAACTTTCCGGAAGGCTGCTGCAATTGCAGGATGAGGAACGGCGGAAGATCGCCCGAGACTTGCACGACGCCACGGGCCAGGATTTGGTAGCACTTTCGAGCACGTTGGGCCATCTGCAGGCGACAACCCCTTCATCGAGCAGAAAGTTGCGGAAGTCCATCTCGCAGTGTCAAGCAGTGGCGGACCGCTGTATCCGTGAAATCCGCACGCTCTCTTACCTGTTGCACCCTCCCCTGCTGGACGAGGCCGGATTAGAGGATGCGATTCGACATTACGCGCCCGGTTTTGCGGAGCGCACGGGCATCGAGGTTGACCTGCAAATAGCACCGGGCTTCGGACGGCTGGCCCAAGAGGAAGAGATGGCCTTGTTCCGAGTGATGCAGGAGAGCTTGGTGAACATTCATCGCCATTCCGGCAGCTTCAGCGCGAGAATTCGGCTGGACCGCAATACGCGGGGAGTCTTGCTGGAAGTAAGCGACAACGGACGAGGCATTCCAGGGAACGGTCAAGGACGAAACAAAGGCCTTTCCTTCGCCGGCGGGGTGGGCGTCCAAAGCATGCAGGAACGGCTGAAACAAGTGGGTGGGCAACTGGAAATCGAATCCAGCACGAATGGCACCACGGTGCGGGCAACGGTACCTGTACATGACTAA
PROTEIN sequence
Length: 985
MNELREFFSSRGFMPHGFCYQWKPLLIWLHGISDTLIAIAYFSIPLALIYLVRKKRNIPFDWMFVCFGTFIAACAATHLMEVVTLWIPVYWISGGVKVIAALASLPTAILLTRVVPQVLNLPSPDDLRSANQELGRQATILREQAALLDLSQDAIQVQTIDGKNLLWNQGAERMYGWSKAEAIGQFDHDLLQTNFARPRNEIIDKLLATGYWDGELQQRRRDGQTIIVSSRWALGRGLDGSAQNVLMIDTDITEQRRAEDAMRESEERFRLMAGNIEEIFWLLDPRSLGVIYVSPAFEHICERPLASIYSNPTSYREIIHSEDVRRVLAQLALLEQTNEFHEQFRIVCPSGTVKWVEGWGFTAKDSIGNVTALVGTVRDITERKRAEDAGRRSEELLRAAFNQAAVGFSMTNMQGQFVKVNRTYCRITGYSEEELLKMNFQSITAPEDLPANLVRMHRLVVGEISNTVYQKRHIRKSGELVWVQNSVSPLWDGNGKVSGFVALTEDITDRKRAEDALRESEDRYRDLVENSSDLICTHDAQGILLSVNETPLRILGYSREELLNKPLRDFVTPETRPLCDAYLAQVQRDGFAKGLLPVVAKSGEVRLWEYNNSLRKEGVSSPVVRGIAHDVTEQKRAEAALRRSEEKFSKAFRSSPVEMVITTLEEGRFLDANESFEKNTRFTREEVIGRTSLELGLWVDPQDRAAVVEEIKKNGRIVNREIRIRAKSGDIGFKLYSAELIQIACEQCLLAVSEDITQRKRAAEGIRKLSGRLLQLQDEERRKIARDLHDATGQDLVALSSTLGHLQATTPSSSRKLRKSISQCQAVADRCIREIRTLSYLLHPPLLDEAGLEDAIRHYAPGFAERTGIEVDLQIAPGFGRLAQEEEMALFRVMQESLVNIHRHSGSFSARIRLDRNTRGVLLEVSDNGRGIPGNGQGRNKGLSFAGGVGVQSMQERLKQVGGQLEIESSTNGTTVRATVPVHD*