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13_1_40cm_4_scaffold_316

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_316_1
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2..991)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003462D9F
ATP-dependent carboxylate-amine ligase
ATP-dependent carboxylate-amine ligase {ECO:0000313|EMBL:AKD04010.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlens
13_1_40cm_4_scaffold_316_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(1311..2084)
DNA (774bp) protein (258aa)
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=TRMD_KORVE
trmD; tRNA (guanine-N(1)-)-methyltransferase
13_1_40cm_4_scaffold_316_3
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2139..2723)
DNA (585bp) protein (195aa)
Ribosome maturation factor RimM n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V8H0_TERSS
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" sou
13_1_40cm_4_scaffold_316_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(2797..3030)
DNA (234bp) protein (78aa)
UPF0109 protein Acid_2571 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024L6_SOLUE
RNA-binding protein; K06960 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
RNA-binding protein
13_1_40cm_4_scaffold_316_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(3193..3432)
DNA (240bp) protein (80aa)
30S ribosomal protein S16 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YJ41_9DELT
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
30S ribosomal protein S16
13_1_40cm_4_scaffold_316_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(3673..4341)
DNA (669bp) protein (223aa)
Putative oxygen regulatory protein NreC n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A347_9PROT
two component LuxR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
two component LuxR family transcriptional regulator
13_1_40cm_4_scaffold_316_7
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4334..7288)
DNA (2955bp) protein (985aa)
PAS domain S-box Tax=RBG_13_Deltaproteobacteria_43_22_curated
Putative Hybrid sensor histidine kinase id=2745675 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
PAS domain-containing protein
13_1_40cm_4_scaffold_316_8
unknown

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7649..7930
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_4_scaffold_316_9

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comp(7990..8382)
DNA (393bp) protein (131aa)
Transcriptional regulator, XRE family (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZP95_9ZZZZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EQD31625.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metage
putative transcriptional regulator
13_1_40cm_4_scaffold_316_10
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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comp(8597..10696)
DNA (2100bp) protein (700aa)
WD40 repeat, subgroup n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TH64_CALNY
wd40 repeat, subgroup
WD40 repeat, subgroup {ECO:0000313|EMBL:ADR18758.1}; Flags: Precursor;; TaxID=768670 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;" source="Calditerrivibrio nitroreducens
13_1_40cm_4_scaffold_316_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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10864..12087
DNA (1224bp) protein (408aa)
Beta-lactamase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024P5_SOLUE
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABJ83531.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
13_1_40cm_4_scaffold_316_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(12120..13463)
DNA (1344bp) protein (448aa)
Signal recognition particle protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024L4_SOLUE
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales
13_1_40cm_4_scaffold_316_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(13606..15360)
DNA (1755bp) protein (585aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X4V9_ACISM
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
13_1_40cm_4_scaffold_316_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(15765..17525)
DNA (1761bp) protein (587aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITV4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39696.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
Displaying 14 items

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