ggKbase home page

13_1_40cm_4_scaffold_6854_12

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: 10681..11529

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25 4.2.1.10) similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 307.0
  • Bit_score: 204
  • Evalue 3.50e-50
Shikimate dehydrogenase / 3-dehydroquinate dehydratase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QK0_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 307.0
  • Bit_score: 204
  • Evalue 1.30e-49
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|SAAS:SAAS00179162}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soliba similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 307.0
  • Bit_score: 204
  • Evalue 1.80e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Solibacter usitatus → Candidatus Solibacter → Solibacterales → Solibacteres → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGGGGACATCGGTCAGATCACGCGCGTCATCGGCCCGGCTCGCGGCTCCTTCCTGACCTATGCGGCTTCGACGATTAGCTCGGCCCCCGGCCAGATGACCGTCCGCGAAATGCGCGACGTTTATCGATTCGGCAAGGTAGGTCGCGAGACAAAGCTGATCGGCATCGTGGGAAATCCGTTGGGTCATTCGCTTTCACCGGTCATTCACAATCGGGCCTTCGACAAGTTGGACCTGGATTTCGTGTACCTGAAGTTTCCGGTTCCGTCGGTAAAGGACTTTTTCGAGAATGCACGAGCCATTGGGATCGAGGGATTCTCCGTTACTATTCCACACAAGACGGCTGTCATTCCTTTTCTGCACGACCAGACTCCCGAAGCTCTCGAGGCCGGCGCGGTGAATACTGTCTTTCAGCGCAACGGTCAATGGATTGGCGACAACACGGACGTTCATGGAGTGCGCGCCGCACTGGCGTCGGCGGCCATTGATCCCGTGGACAAGACCGTCGTCATCCTCGGCCGTGGAGGGGCGGCAAAAGCNNNNNNNNNNNNNNNNNNNNNTGCAGACGCTTCCAACTATCGATGCGATCTGCTGATCAACGCCACCCCGGTCGGGATGTTTCCGGCCGTCGATGCTTCGCCCGTCCATGGCCCGATTCATGCGAATGTAGTACTTGATATGGTCTATAATCCGCCCATAACGCGCCTGCTGAGATCCGCTGCGGACCAGGGAAAAACGGTCATTCAGGGCACGACTATGTTTCTCGCACAGGCGGCCCGGCAATTCGAGATCTGGACGGGCCACCGTGCTCCCGCGGAAGTCTTCGACGAGAAGTCGTATTCTGTATGA
PROTEIN sequence
Length: 283
MGDIGQITRVIGPARGSFLTYAASTISSAPGQMTVREMRDVYRFGKVGRETKLIGIVGNPLGHSLSPVIHNRAFDKLDLDFVYLKFPVPSVKDFFENARAIGIEGFSVTIPHKTAVIPFLHDQTPEALEAGAVNTVFQRNGQWIGDNTDVHGVRAALASAAIDPVDKTVVILGRGGAAKXXXXXXXXADASNYRCDLLINATPVGMFPAVDASPVHGPIHANVVLDMVYNPPITRLLRSAADQGKTVIQGTTMFLAQAARQFEIWTGHRAPAEVFDEKSYSV*