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13_1_40cm_4_scaffold_6854

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6854_1
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

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comp(1..399)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035CDD50
UshA protein
Tax=BJP_IG2102_Elusimicrobia_52_42
13_1_40cm_4_scaffold_6854_2
unknown

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456..950
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_4_scaffold_6854_3
bacterium UASB270, Bacteria

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994..2061
DNA (1068bp) protein (356aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1499967 species="B
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182) id=14627189 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lpxB; lipid-A-disaccharide synthase
13_1_40cm_4_scaffold_6854_4
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2030..2707)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000363048A
putative anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ADV84335.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC
13_1_40cm_4_scaffold_6854_5
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(2713..3354)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000367122E
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_4_scaffold_6854_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(3370..4293)
DNA (924bp) protein (308aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:AEP12994.1}; EC=5.4.2.8 {ECO:0000313|EMBL:AEP12994.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="
Phosphomannomutase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF66_CHLTF
13_1_40cm_4_scaffold_6854_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4774..5808)
DNA (1035bp) protein (345aa)
Nucleotidyltransferase {ECO:0000313|EMBL:CDM65330.1}; EC=2.7.7.13 {ECO:0000313|EMBL:CDM65330.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] id=12556989 bin=CNBR_ACIDO species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nucleotidyl transferase
13_1_40cm_4_scaffold_6854_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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5836..6459
DNA (624bp) protein (208aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_02_FULL_Acidobac
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00038269AA
13_1_40cm_4_scaffold_6854_9
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7085..7900
DNA (816bp) protein (272aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1510391
Prolipoprotein diacylglyceryl transferase n=2 Tax=Geobacter sulfurreducens RepID=LGT_GEOSL
lgt; prolipoprotein diacylglyceryl transferase
13_1_40cm_4_scaffold_6854_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(7848..9188)
DNA (1341bp) protein (447aa)
peptidoglycan-binding LysM Tax=RBG_16_Acidobacteria_70_10_curated
peptidoglycan-binding LysM id=14429754 bin=bin3_NC10 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Peptidoglycan-binding LysM
13_1_40cm_4_scaffold_6854_11
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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9263..10207
DNA (945bp) protein (315aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHT1_MOOTA
13_1_40cm_4_scaffold_6854_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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10681..11529
DNA (849bp) protein (283aa)
shikimate dehydrogenase (EC:1.1.1.25 4.2.1.10)
Shikimate dehydrogenase / 3-dehydroquinate dehydratase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QK0_SOLUE
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|SAAS:SAAS00179162}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soliba
13_1_40cm_4_scaffold_6854_13
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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11526..12428
DNA (903bp) protein (301aa)
homoserine kinase (EC:2.7.1.39); K00872 homoserine kinase [EC:2.7.1.39] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CE86C
homoserine kinase
13_1_40cm_4_scaffold_6854_14
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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12425..13480
DNA (1056bp) protein (352aa)
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate semialdehyde dehydrogenase {ECO:0000313|EMBL:AEP12411.1}; EC=1.2.1.11 {ECO:0000313|EMBL:AEP12411.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidoba
Aspartate semialdehyde dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF1_CHLTF
13_1_40cm_4_scaffold_6854_15
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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13477..14553
DNA (1077bp) protein (359aa)
histidyl-tRNA synthetase 2 (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=574087 species="Bacteria; Fi
Histidine--tRNA ligase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QR30_ACEAZ
13_1_40cm_4_scaffold_6854_16
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14544..15188
DNA (645bp) protein (215aa)
hisG; ATP phosphoribosyltransferase catalytic subunit; K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=GWC2_Geobacteraceae_55_20_curated
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase id=4343509 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_4_scaffold_6854_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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15170..16459
DNA (1290bp) protein (430aa)
Histidinol-phosphate transaminase {ECO:0000256|SAAS:SAAS00083672}; EC=2.6.1.9 {ECO:0000256|SAAS:SAAS00083672};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.
histidinol dehydrogenase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B2E95C
histidinol dehydrogenase
13_1_40cm_4_scaffold_6854_18
RLO_PLX_64_10, Bacteria

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16422..17498
DNA (1077bp) protein (359aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFI7_CHLTF
13_1_40cm_4_scaffold_6854_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17498..18073
DNA (576bp) protein (192aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ34_9BURK
hisB; Imidazoleglycerol-phosphate dehydratase
13_1_40cm_4_scaffold_6854_20
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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18057..18656
DNA (600bp) protein (200aa)
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=GWC2_Pelobacteraceae_58_13_curated
Imidazole glycerol phosphate synthase subunit HisH id=4724814 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hisH; imidazole glycerol phosphate synthase subunit HisH
Displaying 20 items

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