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13_1_40cm_4_scaffold_9427_6

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: comp(4044..5447)

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator Tax=RBG_13_RIF03_48_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 463.0
  • Bit_score: 539
  • Evalue 5.00e-150
Fis family two component sigma-54 specific transcriptional regulator id=12556394 bin=CNBR_ACIDO species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 464.0
  • Bit_score: 473
  • Evalue 1.80e-130
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 456.0
  • Bit_score: 464
  • Evalue 4.10e-128

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Taxonomy

RBG_13_RIF03_48_7_curated → RIF3 → Bacteria

Sequences

DNA sequence
Length: 1404
ATGGACGTAACCAGAGAGCAAATACTTGTAGTCGATGACGAAGAGGATCTTCGCAAGGCTATTGTCGAGATATTGACACTCGATGGTTTTGAGGTCGATCAAGTCGGTAGTGCCGAAGCGGCCGCCGAGAAATTGTCACAGACACATTACGACGTTCTGATTACCGATCATAACCTTCCTGGAAAGACCGGCGTTGAGCTACTCGAGGAGACGTTGGTCCGCTATCCCGAAATAATCGGCGTCGTGATTACCGGCTACGGGACGATCGAGACTGCAGTGTCCGCGATCAAAAAGGGTGCGTACAACTATCTAACGAAGCCCTTCAAGCTGGTCGAACTGCCCATCATGGTGCGCAAGGGACTTCGAGAACGCCAATTGCGTTTCGAAAACCAGTACCTCAAGAAACAGCTCAACGAAAAGTACGGTTTCAACAACATCATCGGCAGCGGCCGCGCGATGAATCGGATTTTCGAGTTGGTTGACACGATCGCCGGCCTGAACAGCACGGTACTGATCCAGGGTGAGACCGGCACAGGAAAAGAATTGATCGCGAAAGCCATCCACTTCAACAGCCCCCGGAAAGACCAGAAGCTGGTGAGCATCAACTGCGGCGCGATTCCGGAAAACCTGCTCGAGTCCGAACTGTTCGGCCACGTCAAGGGTGCGTTTACGGGTGCCGTGCAGACACGTATCGGGCGATTCGAACAGGCGAATGGTGGAACCATCTTCCTGGATGAAATCGGGAATATGCCGATGGCCCTGCAGGTGAAACTGCTGCGCGTTCTGCAGGAACGCGAGTTCGAGCGCGTTGGTGGCAACAGCACAGTAAAAGTGGATGTCCGCATCATCGCCGCAACGAGTTCAAACCTCGACCAAATGGTAAAGGACGGTACGTTCCGCGAGGACCTCTTCTACCGGTTGAATGTAATTCCAATCAATCTTCCGCCGCTGCGTGAACGGCGTGAAGACGTCCCGTTGCTTGTGCAGCGCTTCATCGAACACTTCTGCGAGCGGCACAAGCTCGATCTCAAAACCATTTCGCCTCAGGTAACGAAAGCATTGATGGCCTACGAGTGGCCGGGCAACGTACGGCAGCTGGAGAATATCGTTGAGCGTATGGTCGCCCTGACGGGCAATCGACCGGCAATTCTTCCTACAGATTTGCCGTCAGAAATTCAAAACCGCGAATCCCTAAATTTCGTGCCATTGATCGAAATTCCGGAAGAGGGCATCAATTTCCAGAATGTCGTCACGGACATGGAACGCGAGCTGATTCTTCAGAGTCTGCGCAAGACGAACGGCAACAAGAAACTTGCCGCCAAGTTGCTCAATCTAAAGCGGACTACACTGATCGAAAAAATCAAGCGCATCGGCCTCGGAGAGGAGATCGCAGCCTCGGCGTAA
PROTEIN sequence
Length: 468
MDVTREQILVVDDEEDLRKAIVEILTLDGFEVDQVGSAEAAAEKLSQTHYDVLITDHNLPGKTGVELLEETLVRYPEIIGVVITGYGTIETAVSAIKKGAYNYLTKPFKLVELPIMVRKGLRERQLRFENQYLKKQLNEKYGFNNIIGSGRAMNRIFELVDTIAGLNSTVLIQGETGTGKELIAKAIHFNSPRKDQKLVSINCGAIPENLLESELFGHVKGAFTGAVQTRIGRFEQANGGTIFLDEIGNMPMALQVKLLRVLQEREFERVGGNSTVKVDVRIIAATSSNLDQMVKDGTFREDLFYRLNVIPINLPPLRERREDVPLLVQRFIEHFCERHKLDLKTISPQVTKALMAYEWPGNVRQLENIVERMVALTGNRPAILPTDLPSEIQNRESLNFVPLIEIPEEGINFQNVVTDMERELILQSLRKTNGNKKLAAKLLNLKRTTLIEKIKRIGLGEEIAASA*