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13_1_40cm_4_scaffold_5388

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5388_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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2..724
DNA (723bp) protein (241aa)
phoL; phoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PhoH-related ATPase id=4540909 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
phoL; phoH-like protein
13_1_40cm_4_scaffold_5388_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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761..1201
DNA (441bp) protein (147aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1429438 species="Bacteria; P
Endoribonuclease YbeY n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=YBEY_GEOMG
hypothetical protein
13_1_40cm_4_scaffold_5388_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1236..3926
DNA (2691bp) protein (897aa)
DNA mismatch repair protein MutS n=1 Tax=Thermincola potens (strain JR) RepID=D5XFC1_THEPJ
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" sou
DNA mismatch repair protein MutS
13_1_40cm_4_scaffold_5388_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4365..5744
DNA (1380bp) protein (460aa)
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase (EC:3.5.1.108) Tax=RBG_13_Deltaproteobacteria_52_11_curated
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase (EC:3.5.1.108)
UDP-3-O-acyl-N-acetylglucosamine deacetylase id=4304429 bin=GWC2_Deltaproteobacteria_42_51 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_5388_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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5814..6482
DNA (669bp) protein (223aa)
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entothe
Outer membrane lipoprotein carrier protein LolA id=3990065 bin=GWC2_Deltaproteobacteria_42_51 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Outer-membrane lipoprotein carrier protein
13_1_40cm_4_scaffold_5388_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6818..7600
DNA (783bp) protein (261aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" so
Membrane-associated zinc metalloprotease n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M5B9_GEODF
membrane-associated zinc metalloprotease
13_1_40cm_4_scaffold_5388_7
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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7781..8248
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T5R9_THEA1
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_40cm_4_scaffold_5388_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8310..9548
DNA (1239bp) protein (413aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX04639.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
Transcription elongation factor NusA id=2244618 bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
nusA; transcription elongation factor NusA
13_1_40cm_4_scaffold_5388_9
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9573..10220
DNA (648bp) protein (216aa)
LSU ribosomal protein L7AE n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AMM0_PELPD
hypothetical protein
LSU ribosomal protein L7AE {ECO:0000313|EMBL:ABK98590.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter pro
13_1_40cm_4_scaffold_5388_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10294..12324
DNA (2031bp) protein (677aa)
Translation initiation factor IF-2 n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VWD7_THESW
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" s
translation initiation factor IF-2
13_1_40cm_4_scaffold_5388_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12357..12638
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX00404.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Uncharacterized protein id=4554257 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_5388_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12645..13028
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000382481A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Ca
Ribosome-binding factor A
13_1_40cm_4_scaffold_5388_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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12970..13419
DNA (450bp) protein (150aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7W2S6_PAETH
tRNA pseudouridine synthase b
Displaying 13 items

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