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13_1_40cm_4_scaffold_3159_8

Organism: 13_1_40CM_4_Chloroflexi_52_4

partial RP 20 / 55 MC: 1 BSCG 23 / 51 MC: 1 ASCG 3 / 38 MC: 1
Location: comp(8843..9340)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase clustered with Ku protein, LigD n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPK4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 165.0
  • Bit_score: 214
  • Evalue 7.10e-53
ATP-dependent DNA ligase {ECO:0000313|EMBL:ETZ20850.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 162.0
  • Bit_score: 214
  • Evalue 9.90e-53
DNA ligase D similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 161.0
  • Bit_score: 212
  • Evalue 7.60e-53

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 498
ATGCAAGACTCTCTCGTCTTTGTGGTGCAAAAGCACCAGGCTTCTCGTCTTCATTACGATTTTCGGCTGGAACTCGATGGCGTCTTGAAAAGCTGGGCAGTGCCGAAGGGGCCATCGCTGAACCCAAAAGAGAAACGGCTGGCGATCATGGTGGAAGATCATCCCTTGGAGTATCGAACCTTCGAAGGGGTGATTGCAGAGGGCGAGTATGGAGCAGGAGAAGTAATCGTTTGGGATCAGGGAACATACACACCCCTTGCGAGGAAAACCAAAGACGCAATGCAGGAGCAGGTAAGAAAGCAACTAAACCAGGGAGATCTCCGTTTCCTGCTGTTCGGAGAAAAATTGCGCGGGGAATTCGCGCTCATCCGGCAGCAACGGCTGGGAGAGAAGGCTTGGCTGCTGATCAAAAAACGGGATCACTATGCCTCCGATGCAGATATCACCCTGCAAGACAGGTCAGTCATCACTGGAAAACGGCTTGGAGAAGCCAGATAG
PROTEIN sequence
Length: 166
MQDSLVFVVQKHQASRLHYDFRLELDGVLKSWAVPKGPSLNPKEKRLAIMVEDHPLEYRTFEGVIAEGEYGAGEVIVWDQGTYTPLARKTKDAMQEQVRKQLNQGDLRFLLFGEKLRGEFALIRQQRLGEKAWLLIKKRDHYASDADITLQDRSVITGKRLGEAR*