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13_1_40cm_4_scaffold_3159

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3159_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(1..741)
DNA (741bp) protein (247aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUJ1_RUBXD
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABG04937.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Ru
13_1_40cm_4_scaffold_3159_2
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(931..2274)
DNA (1344bp) protein (448aa)
Extracellular solute-binding protein family 1 n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MQS6_9THEO
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEM77975.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter
13_1_40cm_4_scaffold_3159_3
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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2812..3825
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B278_HERA2
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator Tax=RBG_16_Chloroflexi_57_11_curated
LacI family transcriptional regulator
13_1_40cm_4_scaffold_3159_4

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3902..5380
DNA (1479bp) protein (493aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=77133 species="Bacter
Glycogen synthase n=1 Tax=uncultured bacterium RepID=K2DYQ0_9BACT
glgA; glycogen synthase
13_1_40cm_4_scaffold_3159_5
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5512..5889)
DNA (378bp) protein (126aa)
Putative low-complexity protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XZY1_9FIRM
Putative low-complexity protein {ECO:0000313|EMBL:EHQ92177.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus you
pentapeptide repeat protein
13_1_40cm_4_scaffold_3159_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(6121..8178)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIJ7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89254.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
13_1_40cm_4_scaffold_3159_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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8607..8729
DNA (123bp) protein (41aa)
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
13_1_40cm_4_scaffold_3159_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8843..9340)
DNA (498bp) protein (166aa)
ATP-dependent DNA ligase clustered with Ku protein, LigD n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPK4_9SPHI
ATP-dependent DNA ligase {ECO:0000313|EMBL:ETZ20850.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V
DNA ligase D
13_1_40cm_4_scaffold_3159_9
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(9499..10395)
DNA (897bp) protein (299aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U673_OCEP5
DNA polymerase ligd, polymerase domain protein
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:ADR35946.1}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithe
13_1_40cm_4_scaffold_3159_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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10687..11793
DNA (1107bp) protein (369aa)
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=485913 species="Ba
ATP-dependent DNA ligase I (EC:6.5.1.1)
Probable DNA ligase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUZ0_9CHLR
13_1_40cm_4_scaffold_3159_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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11790..12326
DNA (537bp) protein (179aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Endonuclease III n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TGB0_9CHLR
Endonuclease III
13_1_40cm_4_scaffold_3159_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(12787..13080)
DNA (294bp) protein (98aa)
Putative esterase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJZ0_9CHLR
Putative esterase {ECO:0000313|EMBL:EFH89747.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedon
Displaying 12 items

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