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13_1_40cm_4_scaffold_12082

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_12082_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(39..812)
DNA (774bp) protein (258aa)
nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745149
MazG family protein {ECO:0000313|EMBL:EDY16358.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
MazG family protein
13_1_40cm_4_scaffold_12082_2

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comp(855..1574)
DNA (720bp) protein (240aa)
Integral membrane protein-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAY5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48376.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_4_scaffold_12082_3

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1638..2096
DNA (459bp) protein (153aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTS5_OPITP
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48377.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
13_1_40cm_4_scaffold_12082_4
unknown

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2527..2757
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_4_scaffold_12082_5

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comp(2643..3290)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D4995
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48378.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aminotransferase class I and II family protein
13_1_40cm_4_scaffold_12082_6
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(3351..5054)
DNA (1704bp) protein (568aa)
ABC-type transport system involved in cytochrome c biogenesis, permease component n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K183_9BACT
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:CCG93252.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methyla
cytochrome c assembly protein
13_1_40cm_4_scaffold_12082_7
unknown

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5204..5725
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_4_scaffold_12082_8
Verrucomicrobium spinosum, Verrucomicrobium, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5729..6202
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174685A
13_1_40cm_4_scaffold_12082_9

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6418..7257
DNA (840bp) protein (280aa)
Beta-lactamase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB14_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48382.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
metal-dependent hydrolase, beta-lactamase superfamily I
13_1_40cm_4_scaffold_12082_10
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7267..8502
DNA (1236bp) protein (412aa)
Phosphinothricin n-acetyltransferase, putative n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TC11_9GAMM
Phosphinothricin n-acetyltransferase, putative {ECO:0000313|EMBL:EIT71163.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.
sortase
13_1_40cm_4_scaffold_12082_11
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8568..8945)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003771C86
Uncharacterized protein {ECO:0000313|EMBL:EIM75761.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
hypothetical protein
13_1_40cm_4_scaffold_12082_12
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8971..10380)
DNA (1410bp) protein (470aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=867903 species="Bacteria; Firmi
fumarase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QEX6_9FIRM
13_1_40cm_4_scaffold_12082_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10377..11129)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3C8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19239.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative phospholipid N-methyltransferase
Displaying 13 items

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