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13_1_40cm_4_scaffold_12925

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_12925_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1..840
DNA (840bp) protein (280aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Ch
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8Y0_9BACT
ruvB; Holliday junction DNA helicase RuvB
13_1_40cm_4_scaffold_12925_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

973..2262
DNA (1290bp) protein (430aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWH1_9BACT
exodeoxyribonuclease
13_1_40cm_4_scaffold_12925_3
unknown

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2381..2590
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_4_scaffold_12925_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2828..3736)
DNA (909bp) protein (303aa)
GCN5-related N-acetyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLS0_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EEF59177.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sou
acetyltransferase, ribosomal protein N-acetylase
13_1_40cm_4_scaffold_12925_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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4376..4789
DNA (414bp) protein (138aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QTH4_9RHOB
PilT protein-like protein
13_1_40cm_4_scaffold_12925_6
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

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comp(5869..7077)
DNA (1209bp) protein (403aa)
Serine/threonine protein kinase id=3610884 bin=GWF2_OP3_38_59 species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Serine/threonine protein kinase Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
TPR-repeat-containing protein
13_1_40cm_4_scaffold_12925_7
RLO_RIF05_58_11, RIF5, Bacteria

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comp(7116..7808)
DNA (693bp) protein (231aa)
Serine/threonine protein kinase Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
TPR-repeat-containing protein id=14430838 bin=bin3_NC10 species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
Serine/threonine protein kinase
13_1_40cm_4_scaffold_12925_8
unknown

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comp(7872..8474)
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_40cm_4_scaffold_12925_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8747..10951)
DNA (2205bp) protein (735aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMA
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWG9_9BACT
13_1_40cm_4_scaffold_12925_10
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11519..11746
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Pandoraea RepID=V5UGV9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB76998.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.
13_1_40cm_4_scaffold_12925_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(11978..13168)
DNA (1191bp) protein (397aa)
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037C3FE9
lysyl-tRNA synthetase
13_1_40cm_4_scaffold_12925_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13772..14152
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVY7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21579.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acetolactate synthase small regulatory subunit
13_1_40cm_4_scaffold_12925_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14387..15319
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTR3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21951.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_12925_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15419..16366
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTR1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21949.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_40cm_4_scaffold_12925_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16366..17220
DNA (855bp) protein (285aa)
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D457_9BACT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EDY18658.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_40cm_4_scaffold_12925_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17221..18804
DNA (1584bp) protein (528aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D456_9BACT
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:EDY18657.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
carbohydrate kinase
Displaying 16 items

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