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13_1_40cm_4_scaffold_2859

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2859_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2..1012)
DNA (1011bp) protein (337aa)
L-lysine 6-transaminase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL44_9BACT
L-lysine 6-transaminase {ECO:0000313|EMBL:EEF59395.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
L-lysine 6-transaminase
13_1_40cm_4_scaffold_2859_2
unknown

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comp(1101..1385)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_2859_3
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(1601..2152)
DNA (552bp) protein (184aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
Acyl-CoA dehydrogenase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8A3_9BACT
acyl-CoA dehydrogenase
13_1_40cm_4_scaffold_2859_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2256..3515)
DNA (1260bp) protein (420aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8A3_9BACT
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EDY17296.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_2859_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3636..5690)
DNA (2055bp) protein (685aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8A4_9BACT
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:EDY17297.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_40cm_4_scaffold_2859_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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5809..7206
DNA (1398bp) protein (466aa)
Mg2+ transporter MgtE n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL62_SINAD
Mg2+ transporter MgtE
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaer
13_1_40cm_4_scaffold_2859_7
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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7291..7929
DNA (639bp) protein (213aa)
Phosphate transport regulator related to PhoU n=2 Tax=unclassified Opitutaceae RepID=I6AXI6_9BACT
phosphate transport regulator
Phosphate transport regulator {ECO:0000313|EMBL:AHF89774.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
13_1_40cm_4_scaffold_2859_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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7942..8976
DNA (1035bp) protein (345aa)
Phosphate transporter n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZT45_OPITP
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:ACB75834.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1)
13_1_40cm_4_scaffold_2859_9
Vibrio sp. JCM 18905, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9066..9569)
DNA (504bp) protein (168aa)
Negative modulator of initiation of replication n=2 Tax=Vibrio RepID=D0M5Y0_VIBSE
SeqA protein
Negative modulator of initiation of replication {ECO:0000256|HAMAP-Rule:MF_00908, ECO:0000256|PIRNR:PIRNR019401}; TaxID=1298600 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vib
13_1_40cm_4_scaffold_2859_10
RLO_PLX_64_10, Bacteria

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comp(9676..10716)
DNA (1041bp) protein (347aa)
oxidoreductase domain protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744D7C
dehydrogenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
oxidoreductase domain-containing protein
13_1_40cm_4_scaffold_2859_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10843..11214
DNA (372bp) protein (124aa)
50S ribosomal protein L28 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1U7_9BACT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rpmB; 50S ribosomal protein L28
13_1_40cm_4_scaffold_2859_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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11248..11787
DNA (540bp) protein (180aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW6_9BACT
aspartate 1-decarboxylase
13_1_40cm_4_scaffold_2859_13

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comp(11595..12320)
DNA (726bp) protein (242aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA11700.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein id=4301870 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Displaying 13 items

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