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13_1_40cm_4_scaffold_3333

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3333_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..363
DNA (363bp) protein (121aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=320771 species="Bacteria; Verrucomic
transaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSR4_9BACT
13_1_40cm_4_scaffold_3333_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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523..969
DNA (447bp) protein (149aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAM
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3F6_9BACT
RNA methylase
13_1_40cm_4_scaffold_3333_3

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1092..2060
DNA (969bp) protein (323aa)
Accumulation-associated protein n=7 Tax=Staphylococcus epidermidis RepID=PLS_STAES
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Fis family transcriptional regulator
13_1_40cm_4_scaffold_3333_4
unknown

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2090..2206
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_4_scaffold_3333_5

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2282..3142
DNA (861bp) protein (287aa)
Accumulation-associated protein n=7 Tax=Staphylococcus epidermidis RepID=PLS_STAES
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
accumulation-associated protein
13_1_40cm_4_scaffold_3333_6

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3265..4233
DNA (969bp) protein (323aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW04_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
peptidoglycan-binding domain 1 protein
13_1_40cm_4_scaffold_3333_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4275..5054
DNA (780bp) protein (260aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria;
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3F5_9BACT
ABC transporter
13_1_40cm_4_scaffold_3333_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5205..6200
DNA (996bp) protein (332aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EDY19265.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EDY19265.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;"
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3F4_9BACT
13_1_40cm_4_scaffold_3333_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6284..6781
DNA (498bp) protein (166aa)
UvrB/UvrC protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3F3_9BACT
UvrB/UvrC protein {ECO:0000313|EMBL:EDY19264.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
mcsA; Modulator of heat shock repressor CtsR, McsA
13_1_40cm_4_scaffold_3333_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6778..7902
DNA (1125bp) protein (375aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=497964 species="Bacteria;
Putative ATP:guanido phosphotransferase CfE428DRAFT_3440 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3F2_9BACT
Arginine kinase
13_1_40cm_4_scaffold_3333_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8147..10291
DNA (2145bp) protein (715aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174582D
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
clpA; ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones
13_1_40cm_4_scaffold_3333_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10327..11235)
DNA (909bp) protein (303aa)
Tyrosine recombinase XerC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7L5_9BACT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tyrosine recombinase XerC
Displaying 12 items

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