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13_1_40cm_4_scaffold_4887

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4887_1
unknown

Not on your lists

comp(2..349)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_4887_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(346..879)
DNA (534bp) protein (178aa)
Histidine triad (HIT) protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW46_9BACT
bis(5'-adenosyl)-triphosphatase Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
histidine triad (HIT) protein
13_1_40cm_4_scaffold_4887_3
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1223..1666
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000366EE7F
putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
putative transcriptional regulator
13_1_40cm_4_scaffold_4887_4
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1671..2546
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000364CEDD
ABC transporter, ATPase subunit; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
ABC transporter ATPase
13_1_40cm_4_scaffold_4887_5
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2543..3463
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035E71F4
ABC transporter, inner membrane subunit; K01992 ABC-2 type transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
ABC transporter permease
13_1_40cm_4_scaffold_4887_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3506..4216
DNA (711bp) protein (237aa)
hypothetical protein id=24437570 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_4_scaffold_4887_7
RLO_PLX_64_10, Bacteria

Not on your lists

4236..5339
DNA (1104bp) protein (368aa)
alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
alcohol dehydrogenase id=14628141 bin=bin8_Chloro species=Paenibacillus terrigena genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
alcohol dehydrogenase
13_1_40cm_4_scaffold_4887_8
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5358..6011
DNA (654bp) protein (218aa)
Uncharacterized protein id=4650200 bin=GWA2_Ignavibacteria_55_11 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
13_1_40cm_4_scaffold_4887_9
RLO_PLX_64_10, Bacteria

Not on your lists

6091..7179
DNA (1089bp) protein (363aa)
alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
alcohol dehydrogenase id=14628141 bin=bin8_Chloro species=Paenibacillus terrigena genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
alcohol dehydrogenase
13_1_40cm_4_scaffold_4887_10
unknown

Not on your lists

7279..7548
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_4887_11
unknown

Not on your lists

7548..7937
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_4887_12
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8072..8386
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W032_DESAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV65000.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (
13_1_40cm_4_scaffold_4887_13
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8383..9048
DNA (666bp) protein (222aa)
methyltransferase type 11 n=1 Tax=Spirosoma spitsbergense RepID=UPI000369C4CF
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
methylase involved in ubiquinone/menaquinone biosynthesis
13_1_40cm_4_scaffold_4887_14
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9045..9194
DNA (150bp) protein (50aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPH4_SOLCM
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
methylase involved in ubiquinone/menaquinone biosynthesis
13_1_40cm_4_scaffold_4887_15
unknown

Not on your lists

comp(9473..9754)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_4_scaffold_4887_16
unknown

Not on your lists

comp(9738..10856)
DNA (1119bp) protein (373aa)

This feature has no annotations

13_1_40cm_4_scaffold_4887_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10936..12033
DNA (1098bp) protein (366aa)
5'-3' exonuclease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D756_9BACT
5'-3' exonuclease {ECO:0000313|EMBL:EDY17707.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
exo; 5'-3' exonuclease
13_1_40cm_4_scaffold_4887_18
unknown

Not on your lists

12391..12624
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_4_scaffold_4887_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12621..13310
DNA (690bp) protein (230aa)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EDY17481.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EDY17481.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" so
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7V8_9BACT
Displaying 19 items

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