ggKbase home page

13_1_40cm_4_scaffold_6410

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6410_1
unknown

Not on your lists

comp(252..596)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_4_scaffold_6410_2
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

1046..1975
DNA (930bp) protein (310aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Actinobacteria_64_13_curated
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00035CF57E
selenide, water dikinase
13_1_40cm_4_scaffold_6410_3

Not on your lists

1936..3366
DNA (1431bp) protein (477aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
L-seryl-tRNA selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN0_9BACT
13_1_40cm_4_scaffold_6410_4

Not on your lists

3396..5384
DNA (1989bp) protein (663aa)
Selenocysteine-specific translation elongation factor n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN1_9BACT
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:AAY89283.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
selenocysteine-specific translation elongation factor
13_1_40cm_4_scaffold_6410_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5423..6379
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW82_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21674.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_6410_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6689..8350
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW82_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21674.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_6410_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8337..11483
DNA (3147bp) protein (1049aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW83_9BACT
recombination helicase AddA
13_1_40cm_4_scaffold_6410_8
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11641..12309)
DNA (669bp) protein (223aa)
Myo-inositol-1-phosphate synthase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1Y5_METHD
myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:AGB50418.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="M
13_1_40cm_4_scaffold_6410_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12909..14300
DNA (1392bp) protein (464aa)
Outer membrane efflux protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCA7_9BACT
outer membrane efflux protein Tax=GWF2_Verrucomicrobia_62_7_curated
hypothetical protein
13_1_40cm_4_scaffold_6410_10
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14297..15664
DNA (1368bp) protein (456aa)
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein Tax=GWF2_Verrucomicrobia_62_7_curated
13_1_40cm_4_scaffold_6410_11
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15758..16831
DNA (1074bp) protein (358aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZM7_OPITP
RND family efflux transporter MFP subunit Tax=GWF2_Verrucomicrobia_62_7_curated
RND family efflux transporter MFP subunit
13_1_40cm_4_scaffold_6410_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16828..18066
DNA (1239bp) protein (413aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ANH2_9BACT
hypothetical protein; K09808 lipoprotein-releasing system permease protein Tax=GWF2_Verrucomicrobia_62_7_curated
ABC transporter permease
13_1_40cm_4_scaffold_6410_13
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18063..18794
DNA (732bp) protein (244aa)
ABC transporter-like protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=GWF2_Verrucomicrobia_62_7_curated
ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZD9_OPITP
ABC transporter-like protein
13_1_40cm_4_scaffold_6410_14
unknown

Not on your lists

comp(18736..18888)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 14 items

View Taxonomy