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13_1_40cm_4_scaffold_884

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_884_1

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comp(1..441)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVP2_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48704.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_884_2

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comp(438..842)
DNA (405bp) protein (135aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVP3_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48703.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_884_3

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comp(882..1526)
DNA (645bp) protein (215aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVP4_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48702.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tolQ; MotA/TolQ/ExbB proton channel family protein
13_1_40cm_4_scaffold_884_4

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comp(1643..2158)
DNA (516bp) protein (172aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48701.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_884_5

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2288..2743
DNA (456bp) protein (152aa)
Protein MraZ n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PSG5_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_4_scaffold_884_6

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2765..3763
DNA (999bp) protein (333aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D203_9BACT
S-adenosyl-methyltransferase MraW
13_1_40cm_4_scaffold_884_7

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3764..4132
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D202_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48698.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_884_8

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4129..5946
DNA (1818bp) protein (606aa)
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D201_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48697.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ftsI; Cell division protein FtsI
13_1_40cm_4_scaffold_884_9

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5975..7453
DNA (1479bp) protein (493aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D201_9BACT
UDP-N-acetylmuramyl tripeptide synthetase
13_1_40cm_4_scaffold_884_10
unknown

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comp(8295..8738)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_4_scaffold_884_11

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9050..10063
DNA (1014bp) protein (338aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z9_9BACT
rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
13_1_40cm_4_scaffold_884_12

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10066..11391
DNA (1326bp) protein (442aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z8_9BACT
UDP-N-acetylmuramoylalanine--D-glutamate ligase
13_1_40cm_4_scaffold_884_13

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11388..11996
DNA (609bp) protein (203aa)
Peptidoglycan-binding LysM n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z7_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48692.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_4_scaffold_884_14

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12117..13334
DNA (1218bp) protein (406aa)
Cell cycle protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z6_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48691.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FtsW; cell division membrane protein
13_1_40cm_4_scaffold_884_15

Not on your lists

13337..14491
DNA (1155bp) protein (385aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z5_9BACT
murG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
13_1_40cm_4_scaffold_884_16

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14475..16772
DNA (2298bp) protein (766aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|SAAS:SAAS00041869}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00274693};; EC=1.3.1.98 {ECO:0000256|SAAS:SAAS00057125};; EC=6.3.2.8 {ECO:0000256|SAAS:S
UDP-N-acetylmuramate/alanine ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z4_9BACT
UDP-N-acetylmuramate--L-alanine ligase
13_1_40cm_4_scaffold_884_17

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16769..17707
DNA (939bp) protein (313aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z2_9BACT
13_1_40cm_4_scaffold_884_18

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17704..18789
DNA (1086bp) protein (362aa)
Polypeptide-transport-associated domain protein FtsQ-type n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Z1_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48687.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Polypeptide-transport-associated domain-containing protein FtsQ-type
13_1_40cm_4_scaffold_884_19

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18776..19984
DNA (1209bp) protein (403aa)
Cell division protein ftsA n=2 Tax=Chthoniobacter flavus RepID=B4D1Z0_9BACT
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cell division protein FtsA
13_1_40cm_4_scaffold_884_20

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20082..21491
DNA (1410bp) protein (470aa)
Cell division protein FtsZ n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y9_9BACT
Cell division protein FtsZ {ECO:0000256|RuleBase:RU000631}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cell division GTPase-like protein
13_1_40cm_4_scaffold_884_21
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(21594..22910)
DNA (1317bp) protein (439aa)
amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
Amidohydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8I4_9BACT
M20 (Carboxypeptidase Ss1) subfamily protein
13_1_40cm_4_scaffold_884_22

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23002..25362
DNA (2361bp) protein (787aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA polymerase id=3920271 bin=GWF2_Lentisphaerae_57_35 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
DNA polymerase B region
13_1_40cm_4_scaffold_884_23

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comp(26092..26526)
DNA (435bp) protein (145aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49273.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Peroxiredoxin osmC id=4936714 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
peroxiredoxin
13_1_40cm_4_scaffold_884_24

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comp(26553..27845)
DNA (1293bp) protein (431aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49272.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein id=2153509 bin=GWD2_Deltaproteobacteria_55_8 species=Methylobacterium nodulans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily domain-containing protein
13_1_40cm_4_scaffold_884_25

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comp(27824..28852)
DNA (1029bp) protein (343aa)
epimerase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B34722
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49271.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_884_26

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28942..29370
DNA (429bp) protein (143aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3VNU0_9LEPT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49270.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aldo/keto reductase
Displaying 26 items

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