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13_1_40cm_4_scaffold_2824

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2824_1
unknown

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1..153
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_4_scaffold_2824_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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586..900
DNA (315bp) protein (105aa)
ComEA protein; K02237 competence protein ComEA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=8265767 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
competence protein ComEA-like protein
13_1_40cm_4_scaffold_2824_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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978..1499
DNA (522bp) protein (174aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_4_scaffold_2824_4
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1521..2174)
DNA (654bp) protein (218aa)
HAD-superfamily hydrolase, subfamily IA, variant 1, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4115
haloacid dehalogenase superfamily protein, subfamily IB, phosphoserine phosphatase-like,haloacid dehalogenase superfamily enzyme, subfamily IA Tax=RBG_16_Deltaproteobacteria_49_23_curated
phosphoglycolate phosphatase
13_1_40cm_4_scaffold_2824_5
R_NC10_66_22, NC10, Bacteria

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2360..3148
DNA (789bp) protein (263aa)
cytochrome c biogenesis protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Cytochrome c-type biogenesis protein CcsB id=4323972 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
cytochrome c-type biogenesis protein CcsB
13_1_40cm_4_scaffold_2824_6
R_NC10_66_22, NC10, Bacteria

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3152..4498
DNA (1347bp) protein (449aa)
hemA; glutamyl-tRNA reductase (GluTR) (EC:1.2.1.70) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hemA; glutamyl-tRNA reductase (GluTR) (EC:1.2.1.70) id=14430643 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hemA; glutamyl-tRNA reductase (GluTR) (EC:1.2.1.70)
13_1_40cm_4_scaffold_2824_7
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4506..5435
DNA (930bp) protein (310aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
Porphobilinogen deaminase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RK43_DESPD
13_1_40cm_4_scaffold_2824_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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5432..6991
DNA (1560bp) protein (520aa)
hemD; porphyrin biosynthesis protein HemD (EC:2.1.1.107 4.2.1.75)
Porphyrin biosynthesis protein HemD {ECO:0000313|EMBL:CBK42449.1}; EC=2.1.1.107 {ECO:0000313|EMBL:CBK42449.1};; EC=4.2.1.75 {ECO:0000313|EMBL:CBK42449.1};; TaxID=330214 species="Bacteria; Nitrospirae;
Porphyrin biosynthesis protein HemD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR2_9BACT
13_1_40cm_4_scaffold_2824_9

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comp(6954..9107)
DNA (2154bp) protein (718aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN85662.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
type IV-A pilus assembly ATPase PilB
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB id=1251301 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_4_scaffold_2824_10
CSP1_5_NC10, NC10, Bacteria

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9288..9500
DNA (213bp) protein (71aa)
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10)
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10) id=14430447 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10) Tax=CSP1_5_NC10
Displaying 10 items

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