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13_1_40cm_4_scaffold_5040

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5040_1
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(1..1020)
DNA (1020bp) protein (340aa)
sulfatase (EC:3.1.6.-) Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Arylsulfatase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9P2_9EURY id=5225091 bin=16ft_combo_ws3_JS1 species=Halosarcina pallida genus=Halosarcina taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sulfatase
13_1_40cm_4_scaffold_5040_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1124..2530
DNA (1407bp) protein (469aa)
TPR repeat-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XC0_SOLUE id=5224210 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_4_scaffold_5040_3
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2646..3092
DNA (447bp) protein (149aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_65_10_curated
13_1_40cm_4_scaffold_5040_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

3209..4564
DNA (1356bp) protein (452aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
acetylornithine transaminase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QZP5_PIRSD
13_1_40cm_4_scaffold_5040_5
unknown

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comp(4634..5170)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_4_scaffold_5040_trna_2
unknown

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comp(5237..5315)
DNA (79bp)
transferRNA
13_1_40cm_4_scaffold_5040_trna_1
unknown

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comp(5437..5508)
DNA (72bp)
transferRNA
13_1_40cm_4_scaffold_5040_6
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5603..6016)
DNA (414bp) protein (138aa)
UPF0102 protein STH1475 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Y1475_SYMTH
hypothetical protein
UPF0102 protein STH1475 {ECO:0000255|HAMAP-Rule:MF_00048}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermop
13_1_40cm_4_scaffold_5040_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(6016..6636)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML74_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69916.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_4_scaffold_5040_8
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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comp(6661..7326)
DNA (666bp) protein (222aa)
hypothetical protein id=24447313 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
13_1_40cm_4_scaffold_5040_9
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(7329..7889)
DNA (561bp) protein (187aa)
ECF subfamily RNA polymerase sigma-24 subunit id=14632550 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
ECF subfamily RNA polymerase sigma-24 subunit Tax=CSP1_3_Armatimonadetes
sigma-70 family RNA polymerase sigma factor
13_1_40cm_4_scaffold_5040_10
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(8035..9135)
DNA (1101bp) protein (367aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003726A7F
Displaying 12 items

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