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13_1_40cm_4_scaffold_5459

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5459_1
unknown

Not on your lists

comp(1..459)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_4_scaffold_5459_2
unknown

Not on your lists

664..810
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_4_scaffold_5459_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

807..1484
DNA (678bp) protein (226aa)
Methyltransferase type 11 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QSW8_9DELT
type 11 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
type 11 methyltransferase
13_1_40cm_4_scaffold_5459_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

1484..2056
DNA (573bp) protein (191aa)
Elongation factor P n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLW1_CHLTF
translation elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;"
13_1_40cm_4_scaffold_5459_5
unknown

Not on your lists

2095..2445
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_5459_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2435..3847
DNA (1413bp) protein (471aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=24505316 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RBG_16_RIF_WS3X_71_46_curated
amidase rbh
13_1_40cm_4_scaffold_5459_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3857..4594
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B78F97
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_5459_8
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4601..5977
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZS2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ72575.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="C
13_1_40cm_4_scaffold_5459_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6015..6689
DNA (675bp) protein (225aa)
hypothetical protein id=24577497 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_4_scaffold_5459_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6715..7131)
DNA (417bp) protein (139aa)
tRNA synthetase subunit beta Tax=RBG_16_RIF_WS3X_71_46_curated
tRNA synthetase subunit beta id=24507482 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_40cm_4_scaffold_5459_11
unknown

Not on your lists

comp(7400..8299)
DNA (900bp) protein (300aa)

This feature has no annotations

13_1_40cm_4_scaffold_5459_12
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(8296..9894)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=2 Tax=Leptospira RepID=I0XPQ6_9LEPT id=5225465 bin=16ft_combo_ws3_JS1 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_13_RIF03_48_7_curated
13_1_40cm_4_scaffold_5459_13
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(9882..11912)
DNA (2031bp) protein (677aa)
TonB-dependent receptor n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHA8_HALO1 id=5225464 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
TonB-dependent receptor plug
13_1_40cm_4_scaffold_5459_14
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11909..12868)
DNA (960bp) protein (320aa)
Fibronectin type III domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9C4_9BACT
cell surface protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
hypothetical protein
13_1_40cm_4_scaffold_5459_15
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13462..14295)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AFA78
Polyketide cyclase/dehydrase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
13_1_40cm_4_scaffold_5459_16
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14613..14906
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035F29EE
glycine cleavage system regulatory protein; K03567 glycine cleavage system transcriptional repressor Tax=RBG_13_Deltaproteobacteria_52_11b_curated
glycine cleavage system transcriptional repressor
13_1_40cm_4_scaffold_5459_17
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14899..15135
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035F29EE
glycine cleavage system regulatory protein; K03567 glycine cleavage system transcriptional repressor Tax=RBG_13_Deltaproteobacteria_52_11b_curated
amino acid-binding ACT domain-containing protein
13_1_40cm_4_scaffold_5459_18
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15135..15692
DNA (558bp) protein (186aa)
Lipid A biosynthesis acyltransferase id=2298143 bin=GWB2_Pelobacter_53_15 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ACD95923.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobac
13_1_40cm_4_scaffold_5459_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15689..16063
DNA (375bp) protein (125aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] id=14627959 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
lipid A biosynthesis acyltransferase
13_1_40cm_4_scaffold_5459_20
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(16018..17511)
DNA (1494bp) protein (498aa)
AMP-dependent synthetase and ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY54_9BACT
acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Tax=RBG_13_Acidobacteria_68_16_curated
AMP-dependent synthetase/ligase
13_1_40cm_4_scaffold_5459_21
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

17722..18012
DNA (291bp) protein (97aa)
Glycosyl transferase group 1 n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LTL5_DESBD
Uncharacterized protein {ECO:0000313|EMBL:KDA53168.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
group 1 glycosyl transferase
Displaying 21 items

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