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13_1_40cm_4_scaffold_7230

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7230_1
unknown

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comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_4_scaffold_7230_2
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(180..1856)
DNA (1677bp) protein (559aa)
OstA-like protein; K09774 lipopolysaccharide export system protein LptA Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_1_40cm_4_scaffold_7230_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(1866..2651)
DNA (786bp) protein (262aa)
short chain enoyl-CoA hydratase; K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
short chain enoyl-CoA hydratase (EC:4.2.1.17); K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] id=16783855 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
13_1_40cm_4_scaffold_7230_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(2673..3563)
DNA (891bp) protein (297aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD6_KORVE
3-hydroxyacyl-CoA dehydrogenase
13_1_40cm_4_scaffold_7230_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3608..4822)
DNA (1215bp) protein (405aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=uncultured marine group II euryarchaeote EF100_57A08 RepID=A9QP30_9EURY id=5224563 bin=16ft_combo_ws3_JS1 species=uncultured marine group II euryarchaeote EF100_57A08 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_4_scaffold_7230_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(4819..5604)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003703CC9
IstB domain-containing protein ATP-binding protein; K02315 DNA replication protein DnaC Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
dnaI; primosomal protein dnaI
13_1_40cm_4_scaffold_7230_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(5630..6343)
DNA (714bp) protein (238aa)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.
hypothetical protein id=8266551 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
rpoD; RNA polymerase sigma factor RpoD
13_1_40cm_4_scaffold_7230_8
CSP1_5_NC10, NC10, Bacteria

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comp(6909..7532)
DNA (624bp) protein (208aa)
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK id=14431068 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK Tax=CSP1_5_NC10
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK
13_1_40cm_4_scaffold_7230_9
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8020..8490)
DNA (471bp) protein (157aa)
Heat shock protein Hsp20 id=14623378 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
Heat shock protein Hsp20 Tax=CSP1_8_Deltaproteobacteria
heat shock protein Hsp20
13_1_40cm_4_scaffold_7230_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(8487..9137)
DNA (651bp) protein (217aa)
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Chaperone protein DnaK id=4505166 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dnaK; molecular chaperone DnaK
Displaying 10 items

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