ggKbase home page

13_1_40cm_4_scaffold_7926

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7926_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1..720)
DNA (720bp) protein (240aa)
split soret cytochrome c precursor id=24544005 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
split soret cytochrome c precursor Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_40cm_4_scaffold_7926_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(873..1922)
DNA (1050bp) protein (350aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVI0_METMA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
13_1_40cm_4_scaffold_7926_3
unknown

Not on your lists

comp(2521..2682)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_7926_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3351..4208
DNA (858bp) protein (286aa)
id=2907553 Tax=RBG_16_Gamma2_65_34_curated
id=2907553 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
13_1_40cm_4_scaffold_7926_5
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

4267..6279
DNA (2013bp) protein (671aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJY2_NITGG
quinoprotein glucose/sorbosone dehydrogenase
Tax=BJP_IG2102_BRC1_58_13
13_1_40cm_4_scaffold_7926_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

6420..6974
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH7_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_4_scaffold_7926_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

6991..7563
DNA (573bp) protein (191aa)
Translation elongation factor P (EF-P) n=2 Tax=Burkholderiaceae RepID=Q0K9N0_CUPNH
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.
efp1; translation elongation factor P (EF-P)
13_1_40cm_4_scaffold_7926_8
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7576..8067)
DNA (492bp) protein (164aa)
P450 cytochrome, putative n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UJK5_CYAP2
P450 cytochrome
P450 cytochrome, putative {ECO:0000313|EMBL:ADN12249.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
13_1_40cm_4_scaffold_7926_9
unknown

Not on your lists

comp(8064..8324)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_7926_10

Not on your lists

comp(8348..8722)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000375FEC7
Marine sediment metagenome DNA, contig: S06H3_C02090 {ECO:0000313|EMBL:GAH89905.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA polymerase beta domain-containing protein
13_1_40cm_4_scaffold_7926_11
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9401..10015)
DNA (615bp) protein (205aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=GWC2_RIF_CHLX_73_18_curated
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent id=2566072 bin=GWC2_Chloroflexi_73_18 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
vitamin B12-dependent ribonucleotide reductase
Displaying 11 items

View Taxonomy