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13_1_40cm_4_scaffold_12264_7

Organism: 13_1_40CM_4_Acidobacteria_69_4

partial RP 15 / 55 BSCG 19 / 51 ASCG 7 / 38
Location: 11112..13193

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 691.0
  • Bit_score: 584
  • Evalue 1.50e-163
Fis family transcriptional regulator id=12556814 bin=CNBR_ACIDO species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 521.0
  • Bit_score: 436
  • Evalue 4.80e-119
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 369.0
  • Bit_score: 334
  • Evalue 5.60e-89

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Taxonomy

R_Acidobacteria_68_18 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2082
ATGGCGCGCATCGATAGTCATGAAGGCATTCCGTCGCGCGCCGGTGCCCGTCGCGCGCCGGAGCCGTATGTCCTGATGGAACCTGATCCGCTGGCAGCCGCCCTCAGTCGCATCGCGCGGGCGGTTTCCGAAACCCTCGAGTTGAAGGACGTCTTCGCGCGCGTCGCCGAAGCCGCGGCCACCGTCCTGCCTTTCGACACGATGGGGGTGACGCGCCTCGAGACGCCGGACACGGTGAGGCGCTACGCGGTCGCCGGCCGTTTTGTGCCCGAGGATCTCTCGCGCGTCTTCTCCCTGGAGGACTTCTCCCCGGCGATACGGCCGCAGGTCGGGAGTGTCGAGCGGATCGACGAGGCAACCATCCAGCTCGACCCGAGCTTCCCCGTGGACGGCGAGATCCTGCGGCAGGGCGTCCGGTCGCTCCTCCGCCTCCTCCTGCTGACGCGGGGCCGGCTCGCCGGCACCGTCTGGTTCGCCTCGGCTCGCCCGGGCGCCTTCACGGCCGAGCACCAGGCGATCCTCAAGCCGATCGCGGACCTCCTGGCCCTGGCGCTCGAGCACGAGCGGCTCTGGGATCTCGACGCCGCGCGCAGGCGCCGCCTGGACGCCATCGACGCGCTGCTCCTCACGATGGCCGGATCGCTCGACGTCCGCGACATCTTCAACCGCGTCTCCGAGATCGTGAAGCCGGTCCTGCCGCACGATCGGCTGATGCTCACCTCGTTGAGCCCCGACCGTCGCGAGATCACGGTGGACGCGGTTTCCGGCGATCCGGTCCCCGACCTCCCGACGCGGATGCCGGCGGGAGACCCGGCCCACTGCCAGCACGGGCGGGAATACGTGCTGATCCCGGACGTCGAGGACGAGGCGGAGGCCTGCTCCAGGGCCCGGCCGGCGTGCCGTTTGCTCGGTATCCGATCGCTCCTCAAGATCCAGCTGCGCCTCGACGGCGGCTTCGGCTGGCTGCTGTTCCTGTCGCGGGTTCCGCGCCAGTACTCCGAAGAGGACGTGGTCGTGGCCCGGCGCGTGGCGGACCACGTNNNNNNNNNNNNCCGCCTCGAAGAGCGCGTCGAGGCGCTACGGGACGAGCTGGAGACGACCCGCGGTTACCGCCGGGTGGTCGGCGAATCGAAGAAATGGAAGGCGGTCCTCACCCACGCGGCCAAGGTGGCGCCGACGGAGACCACCGTCCTCCTCACCGGGGAGTCGGGCACCGGCAAGGAGGTCGTGGCCCGCTTCATCCACCAGGGGTCGCCGCGAGCCCGGGGCCCGTTCGTGGCGCTCAACTGCGCGGCCCTGCCGGAGACGCTGCTCGAATCCGAGCTCTTCGGCCACGAGAAGGGGGCGTTCACGGGAGCGGCGGCCGCGTACCGGGGCCGGATCGAGCAGGCCGCGGGGGGAGTCCTGTTTCTCGATGAAGTCGGCGAGATGAGCCGCGCCGTCCAGGCCAAGTTCCTGCGCGTCCTGCAGGAGCGCGAGTACCAGCGCCTGGGCGGGACCCGCCCGATCAAGGCGGACGTGCGGGTCGTGGCGGCCACGAACCGGGATCTCGAGGCGGCCCTCGCACGGGGCGATTTCCGCGAGGACCTCTACTACAGGTTGCGCGTCTTCGAGATCCGTCTTCCCCCGCTCCGCGAGCGGCGCGACGACATCCTTCCGATGGCCGAGGCGTTCCTGGAGGAGATCGGAGCCGCGGTGGGCCGGCCGGCGGCCGGAATCTCGCGCCAGGCGCACGAGGCGCTGCTGGCCTACCCCTGGCCCGGCAACGTGCGCGAGCTGCGCAACGCTCTCGAGCGGGCGACGATCCTCTGCGACGGCGGCCTGATCACGATCGACCATCTCCCGATCGGAGGGGGCCGGTCCGGCCCTGCCCCCGGACCGGCCACGGGAAGCCCCGGTGTTCTGCCTGCCGGCGGCGTCAGCCTGGAGGGGGTGGAGCGCGACCTGATCAGCAAGGCGCTCCAGGAGACGCGCAATAACCGCTCGCGGGCGGCGCGTCTCCTCGGCATCACGCGCTCGCAGCTCTACTCCAGGATGCAGAAGCACGGCCTGGACGCGGCCCCGGCCCGGGCCCGCGACTGA
PROTEIN sequence
Length: 694
MARIDSHEGIPSRAGARRAPEPYVLMEPDPLAAALSRIARAVSETLELKDVFARVAEAAATVLPFDTMGVTRLETPDTVRRYAVAGRFVPEDLSRVFSLEDFSPAIRPQVGSVERIDEATIQLDPSFPVDGEILRQGVRSLLRLLLLTRGRLAGTVWFASARPGAFTAEHQAILKPIADLLALALEHERLWDLDAARRRRLDAIDALLLTMAGSLDVRDIFNRVSEIVKPVLPHDRLMLTSLSPDRREITVDAVSGDPVPDLPTRMPAGDPAHCQHGREYVLIPDVEDEAEACSRARPACRLLGIRSLLKIQLRLDGGFGWLLFLSRVPRQYSEEDVVVARRVADHXXXXXRLEERVEALRDELETTRGYRRVVGESKKWKAVLTHAAKVAPTETTVLLTGESGTGKEVVARFIHQGSPRARGPFVALNCAALPETLLESELFGHEKGAFTGAAAAYRGRIEQAAGGVLFLDEVGEMSRAVQAKFLRVLQEREYQRLGGTRPIKADVRVVAATNRDLEAALARGDFREDLYYRLRVFEIRLPPLRERRDDILPMAEAFLEEIGAAVGRPAAGISRQAHEALLAYPWPGNVRELRNALERATILCDGGLITIDHLPIGGGRSGPAPGPATGSPGVLPAGGVSLEGVERDLISKALQETRNNRSRAARLLGITRSQLYSRMQKHGLDAAPARARD*