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13_1_40cm_4_scaffold_21052_7

Organism: 13_1_40CM_4_Acidobacteria_69_4

partial RP 15 / 55 BSCG 19 / 51 ASCG 7 / 38
Location: comp(4313..5332)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase (EC:3.2.1.17) similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 328.0
  • Bit_score: 201
  • Evalue 3.60e-49
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetacea similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 328.0
  • Bit_score: 201
  • Evalue 1.80e-48
Pseudouridine synthase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWH6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 319.0
  • Bit_score: 206
  • Evalue 5.20e-50

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Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1020
ATGCCGCCAGCCGTCAAGACCGTCATCATCGAGGTGACACGGGAGGACTCCGGCCGCACGCTGCAGGCGGTCCTGCACGACCGCGGCGGCTTCAGCCACGGGCAGGCGCGCGGTCTCATCGACGCCGGGGCGGTGCGCGGGCCGCTCCGCGGCGCTCCGGGGCTCGAGCCCGCCCGCCGGAGAAGGCACGCCAGCGCCGCCGTGGGCCGCGGCGAATACGCCCATCGAGTCGCCAGCGGCGACCGCTACGAGGTCCGTCTCGAGCCCGAACGGCGGTATCGCCCCAAGCCGCCGCCGCGCCCCGGGCCCGGGTACAAGGTCGTCTACGAGGACCGCGAGCTCCTGGTCGTCGAGAAACAACCCCACCTCCTGAGCGTTCCGACCCCGCTGCGCGAGAGGGAGGACAGCCTCGTCGAGCGGCTCCTCGAGTCCGAGAGGGAAAGGGGATTCCGCAACCCGGCGCTGTACGCCCTGAACCGCCTCGACCGCGATACGTCGGGCCTGCTGCTGTTCGCGCGCTCCCGGCGCGCTTTCGAGGGGCTCGAGTCCCAGTTCAAGACCCGCACCATCGAGCGTCTGTACACGGCGGTCGCGACCGGCGCGGTCGAGCACGACGAGGGCCGCTTCGAGAGCCGGCTCGTCGAGGACCCGAGGAACCTGCGCATGCGCTCCACCCGTCGCCGGGGCGAGGGGAAGGAGGCGATCACCGAGTACAAGGTGACCGAGCGTCTCTGCGGCGCCACGCTGCTGTCCGTCCGACTGCGCACCGGCCGCAGGAACCAGATCCGCGTCCACCTGGCGGAGGCCGGCCACCCCCTCGTCGGCGACCGCCAGTACGGCAAGCCCTCGCGCCTCATCGGCCGGACCGCCCTGCACGCCCGGAGCCTGCGCTTCATCCATCCCGTGACCGGCAAGACCGTGGTGTTCGAGTCCTTCCTGCCGCGCGACCTGCGCCGGCTGATCAAGAAGTTGCGCAACGAGAAGGGCGCCTCGCCGAGCGTTGATTCGCACGGGGCTTGA
PROTEIN sequence
Length: 340
MPPAVKTVIIEVTREDSGRTLQAVLHDRGGFSHGQARGLIDAGAVRGPLRGAPGLEPARRRRHASAAVGRGEYAHRVASGDRYEVRLEPERRYRPKPPPRPGPGYKVVYEDRELLVVEKQPHLLSVPTPLREREDSLVERLLESERERGFRNPALYALNRLDRDTSGLLLFARSRRAFEGLESQFKTRTIERLYTAVATGAVEHDEGRFESRLVEDPRNLRMRSTRRRGEGKEAITEYKVTERLCGATLLSVRLRTGRRNQIRVHLAEAGHPLVGDRQYGKPSRLIGRTALHARSLRFIHPVTGKTVVFESFLPRDLRRLIKKLRNEKGASPSVDSHGA*