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13_1_40cm_4_scaffold_21052

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_21052_1
unknown

Not on your lists

comp(1..186)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_4_scaffold_21052_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(291..680)
DNA (390bp) protein (130aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Methylmalonyl-CoA epimerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ8_KORVE
methylmalonyl-CoA epimerase
13_1_40cm_4_scaffold_21052_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(677..1000)
DNA (324bp) protein (108aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein id=12556479 bin=CNBR_ACIDO species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_4_scaffold_21052_4
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1021..1518)
DNA (498bp) protein (166aa)
Marine sediment metagenome DNA, contig: S01H1_L05514 Tax=RBG_16_Deltaproteobacteria_71_12_curated
13_1_40cm_4_scaffold_21052_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1606..2448)
DNA (843bp) protein (281aa)
biotin carboxylase-like Tax=CSP1_6_Rokubacteria
biotin carboxylase-like id=14626151 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
biotin carboxylase-like
13_1_40cm_4_scaffold_21052_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3374..4243)
DNA (870bp) protein (290aa)
citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] id=14424468 bin=bin1_lowGC species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin1_lowGC organism_group=Unknown_CP
citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=CSP1_2_Dadabacteria
gltA; citrate synthase (EC:2.3.3.1)
13_1_40cm_4_scaffold_21052_7
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4313..5332)
DNA (1020bp) protein (340aa)
RluA family pseudouridine synthase (EC:3.2.1.17)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetacea
Pseudouridine synthase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWH6_9BACT
13_1_40cm_4_scaffold_21052_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5371..5712)
DNA (342bp) protein (114aa)
Anti-sigma factor antagonist n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4D1_ACIC5
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anti-anti-sigma factor family protein
13_1_40cm_4_scaffold_21052_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(5741..6940)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IN83_ANADE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_21052_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6888..9128)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UBU7_ANASK
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_4_scaffold_21052_11
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10850..12514)
DNA (1665bp) protein (555aa)
Chloride channel core n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A9A065_DESOH
chloride channel core protein
Chloride channel core {ECO:0000313|EMBL:ABW68984.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus o
13_1_40cm_4_scaffold_21052_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12523..12957)
DNA (435bp) protein (145aa)
Chloride channel protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SIG6_9DELT
Chloride channel protein {ECO:0000313|EMBL:KFE67054.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hya
ynfJ1; voltage-gated chloride channel
13_1_40cm_4_scaffold_21052_13
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13121..13867
DNA (747bp) protein (249aa)
sodium:solute antiporter n=1 Tax=Streptococcus caballi RepID=UPI000369BE21
MATE efflux family protein {ECO:0000313|EMBL:CDE45091.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostrid
multidrug resistance protein, MATE family
Displaying 13 items

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