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13_1_40cm_4_scaffold_5787_3

Organism: 13_1_40CM_4_Acidobacteria_69_4

partial RP 15 / 55 BSCG 19 / 51 ASCG 7 / 38
Location: 2918..3517

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMD0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 179.0
  • Bit_score: 141
  • Evalue 7.10e-31
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF58972.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 179.0
  • Bit_score: 141
  • Evalue 9.90e-31
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 190.0
  • Bit_score: 135
  • Evalue 1.40e-29

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 600
GTGGTCGACGATGCGAGCGATGCGTCCCTTCTGGCCAGGGCCGCCGCCGGCGAGGCGGCGGCCTTCGACCTGCTGGTGGGGCGGTGGAAGAATCGCCTCTTCCGGCTGGCCCTGCGCTTCTTTCGCCGCCCCGAGGACGCGGAAGAGATCGCCCAGGAGGTGTTCTTGAAGGTGTACCGCATGGCCGCGAGCTACCGGTCGGACGCGCCATTCGAGCACTGGCTCCTGCGGATCGCGACCAACACCTGCGTCGATAGGCTGCGCGAGCGGCGCCGGCGCAGGGAGGATATCCTGGCCGACATCACCCCGGACGCGGGCGCCTGGCTCGACGCGGCGCTCGCGGGGGCGTCGCAGGAAGCGCAGCAGGCGGAGGCCGCCCGGGCCCTCGCGGCCGATCTCCTGGACAGCCTGCCGCCGAAGGACCGGATGGTGCTGGTCCTGATGGATCTCGAGGGCCTGTCGGCGCGGGAGGTGGCTGCCTCCACTGGGTCGACGCGCGCCGCCGTGAAGGTGCGCGCCCTGCGCGCCCGGCGGGCGCTTCGGCGGCTTGCGGACGGGATTCCGCGCCGGAGCGAGGGCCCGCAAGGAGGCCGACGATGA
PROTEIN sequence
Length: 200
VVDDASDASLLARAAAGEAAAFDLLVGRWKNRLFRLALRFFRRPEDAEEIAQEVFLKVYRMAASYRSDAPFEHWLLRIATNTCVDRLRERRRRREDILADITPDAGAWLDAALAGASQEAQQAEAARALAADLLDSLPPKDRMVLVLMDLEGLSAREVAASTGSTRAAVKVRALRARRALRRLADGIPRRSEGPQGGRR*