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13_1_40cm_4_scaffold_5787

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5787_1
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(2..1216)
DNA (1215bp) protein (405aa)
FG-GAP repeat protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQK0_OPITP
FG-GAP repeat-containing protein
FG-GAP repeat protein {ECO:0000313|EMBL:ACB75609.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain
13_1_40cm_4_scaffold_5787_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1239..2579)
DNA (1341bp) protein (447aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Ste24 endopeptidase (EC:3.4.24.84)
Ste24 endopeptidase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZP6_HALO1
13_1_40cm_4_scaffold_5787_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2918..3517
DNA (600bp) protein (200aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMD0_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF58972.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_4_scaffold_5787_4
unknown

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3514..3888
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_40cm_4_scaffold_5787_5
unknown

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3885..4268
DNA (384bp) protein (128aa)
hypothetical protein
13_1_40cm_4_scaffold_5787_6
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4363..5874
DNA (1512bp) protein (504aa)
Sensor protein (EC:2.7.13.3) Tax=RBG_16_Gammaproteobacteria_66_13_curated
Sensor protein (EC:2.7.13.3) rbh
Putative Sensor protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFS3_9BACT
13_1_40cm_4_scaffold_5787_7
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6740..7195
DNA (456bp) protein (152aa)
Probable two-component system response regulator (Ntr family protein) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYB0_9PLAN
Fis family transcriptional regulator Tax=RBG_16_Gammaproteobacteria_66_13_curated
sigma-54 dependent DNA-binding response regulator
13_1_40cm_4_scaffold_5787_8
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7371..7919
DNA (549bp) protein (183aa)
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family n=1 Tax=Marichromatium purpuratum 984 RepID=F9U4F4_MARPU
Fis family transcriptional regulator {ECO:0000313|EMBL:KGO33933.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="
glnG; nitrogen regulation protein NR(I)
13_1_40cm_4_scaffold_5787_9
unknown

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7919..8128
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_4_scaffold_5787_10
unknown

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8153..8359
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_5787_11
unknown

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8420..9169
DNA (750bp) protein (250aa)

This feature has no annotations

13_1_40cm_4_scaffold_5787_12
unknown

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comp(9132..9926)
DNA (795bp) protein (265aa)

This feature has no annotations

13_1_40cm_4_scaffold_5787_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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10286..10879
DNA (594bp) protein (198aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_40cm_4_scaffold_5787_14
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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comp(11852..13126)
DNA (1275bp) protein (425aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TK02_CALNY
aromatic hydrocarbon degradation membrane protein
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:ADR18253.1}; Flags: Precursor;; TaxID=768670 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;
13_1_40cm_4_scaffold_5787_15
unknown

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13359..13451
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 15 items

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