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13_1_40cm_2_scaffold_1261

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1261_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1..906
DNA (906bp) protein (302aa)
gatE; Glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.-)
glutamyl-tRNA(Gln) amidotransferase subunit E id=14428592 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
glutamyl-tRNA(Gln) amidotransferase subunit E Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_1261_trna_1
unknown

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comp(916..1000)
DNA (85bp)
transferRNA
13_1_40cm_2_scaffold_1261_2
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1275..1826)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EJB0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA04807.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_40cm_2_scaffold_1261_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(1832..2929)
DNA (1098bp) protein (366aa)
Chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVH9_9ARCH
Chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK {ECO:0000313|EMBL:CDI06518.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumar
dnaJ; chaperone Hsp40, co-chaperone with DnaK
13_1_40cm_2_scaffold_1261_4
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2968..4794)
DNA (1827bp) protein (609aa)
Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVE1_9ARCH
dnaK; chaperone Hsp70, co-chaperone with DnaJ
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
13_1_40cm_2_scaffold_1261_5
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4787..5368)
DNA (582bp) protein (194aa)
Protein GrpE n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B8N8_9ARCH
GrpE protein HSP-70 cofactor
Protein GrpE {ECO:0000256|RuleBase:RU000639}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
13_1_40cm_2_scaffold_1261_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5405..6538)
DNA (1134bp) protein (378aa)
hypothetical protein id=14428597 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_1261_7

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6727..7695
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00036C6B9C rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF17536.1}; TaxID=1456288 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_77_H05.;"
hypothetical protein
13_1_40cm_2_scaffold_1261_8
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7719..9035)
DNA (1317bp) protein (439aa)
Bacteriocin biosynthesis cyclodehydratase, SagC family {ECO:0000313|EMBL:EPA05176.1}; EC=6.3.-.- {ECO:0000313|EMBL:EPA05176.1};; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitros
Bacteriocin biosynthesis cyclodehydratase, SagC family (EC:6.3.-.-)
Bacteriocin biosynthesis cyclodehydratase, SagC family n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E6V0_9ARCH rbh
13_1_40cm_2_scaffold_1261_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(9036..10256)
DNA (1221bp) protein (407aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota a
Threonine synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU70_9ARCH
threonine synthase
13_1_40cm_2_scaffold_1261_10
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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10490..10972
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2DYX4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA04370.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_40cm_2_scaffold_1261_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(10975..11307)
DNA (333bp) protein (111aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=1407055 species="Archaea; Th
hisI; Phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV08_9ARCH
13_1_40cm_2_scaffold_1261_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11337..12140)
DNA (804bp) protein (268aa)
Imidazole glycerol phosphate synthase cyclase subunit id=14427257 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
Imidazole glycerol phosphate synthase cyclase subunit Tax=CSP1_1_Thaumarchaeota
hisF; imidazoleglycerol phosphate synthase, cyclase subunit
13_1_40cm_2_scaffold_1261_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12796..13401)
DNA (606bp) protein (202aa)
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit id=14427259 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Tax=CSP1_1_Thaumarchaeota
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
13_1_40cm_2_scaffold_1261_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13401..13988)
DNA (588bp) protein (196aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=14427260 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=CSP1_1_Thaumarchaeota
hisB; Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
13_1_40cm_2_scaffold_1261_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14013..14999)
DNA (987bp) protein (329aa)
hydrolase id=14427261 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
hydrolase Tax=CSP1_1_Thaumarchaeota
hydrolase
13_1_40cm_2_scaffold_1261_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14996..16066)
DNA (1071bp) protein (357aa)
class I/II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=14427262 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
class I/II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=CSP1_1_Thaumarchaeota
class I/II aminotransferase
13_1_40cm_2_scaffold_1261_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16066..17334)
DNA (1269bp) protein (423aa)
histidinol dehydrogenase id=14427263 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
histidinol dehydrogenase Tax=CSP1_1_Thaumarchaeota
histidinol dehydrogenase
13_1_40cm_2_scaffold_1261_18

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comp(17334..18311)
DNA (978bp) protein (326aa)
ATP phosphoribosyltransferase (HisG) {ECO:0000313|EMBL:AIF24065.1}; EC=2.4.2.17 {ECO:0000313|EMBL:AIF24065.1};; TaxID=1456396 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultu
ATP phosphoribosyltransferase HisG (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037DF0C4 rbh
13_1_40cm_2_scaffold_1261_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(18352..19605)
DNA (1254bp) protein (418aa)
3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARP4_9ARCH rbh
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified
hydroxymethylglutaryl-CoA reductase, degradative
13_1_40cm_2_scaffold_1261_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19607..20701)
DNA (1095bp) protein (365aa)
glucose sorbosone dehydrogenase id=14427266 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
glucose sorbosone dehydrogenase Tax=CSP1_1_Thaumarchaeota
glucose sorbosone dehydrogenase
Displaying 21 items

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